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Author Details

Robert Gentleman
Center for Computational Biomedicine, Harvard Medical School
1991
83
40
PMIDPaper TitleJournal TitlePublished Year
36794911BioPlexR and BioPlexPy: integrated data products for the analysis of human protein interactions.Bioinformatics2023
36794911BioPlexR and BioPlexPy: integrated data products for the analysis of human protein interactions.Bioinformatics2023
32597744Demographic, spatial and temporal dietary intake patterns among 526 774 23andMe research participants.Public Health Nutr2021
32597744Demographic, spatial and temporal dietary intake patterns among 526 774 23andMe research participants.Public Health Nutr2021
33420020Disease risk scores for skin cancers.Nat Commun2021
33420020Disease risk scores for skin cancers.Nat Commun2021
29955106Addressing the accuracy of direct-to-consumer genetic testing.Genet Med2019
29955106Addressing the accuracy of direct-to-consumer genetic testing.Genet Med2019
29028267VariantTools: an extensible framework for developing and testing variant callers.Bioinformatics2017
28938910Creating a data resource: what will it take to build a medical information commons?Genome Med2017
29028267VariantTools: an extensible framework for developing and testing variant callers.Bioinformatics2017
28938910Creating a data resource: what will it take to build a medical information commons?Genome Med2017
26768488Complex regulation of ADAR-mediated RNA-editing across tissues.BMC Genomics2016
27218464Prediction and Quantification of Splice Events from RNA-Seq Data.PLoS One2016
26768488Complex regulation of ADAR-mediated RNA-editing across tissues.BMC Genomics2016
27568559Recurrent Loss of NFE2L2 Exon 2 Is a Mechanism for Nrf2 Pathway Activation in Human Cancers.Cell Rep2016
27218464Prediction and Quantification of Splice Events from RNA-Seq Data.PLoS One2016
27568559Recurrent Loss of NFE2L2 Exon 2 Is a Mechanism for Nrf2 Pathway Activation in Human Cancers.Cell Rep2016
25485619A comprehensive transcriptional portrait of human cancer cell lines.Nat Biotechnol2015
25633503Orchestrating high-throughput genomic analysis with Bioconductor.Nat Methods2015
25485619A comprehensive transcriptional portrait of human cancer cell lines.Nat Biotechnol2015
25633503Orchestrating high-throughput genomic analysis with Bioconductor.Nat Methods2015
24162561Discriminative motif analysis of high-throughput dataset.Bioinformatics2014
24162561Discriminative motif analysis of high-throughput dataset.Bioinformatics2014
24297535Integrative analysis of two cell lines derived from a non-small-lung cancer patient--a panomics approach.Pac Symp Biocomput2014
24132929gCMAP: user-friendly connectivity mapping with R.Bioinformatics2014
24297535Integrative analysis of two cell lines derived from a non-small-lung cancer patient--a panomics approach.Pac Symp Biocomput2014
24132929gCMAP: user-friendly connectivity mapping with R.Bioinformatics2014
23566431Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites.Skelet Muscle2013
23950696Software for computing and annotating genomic ranges.PLoS Comput Biol2013
24104757The anatomy of successful computational biology software.Nat Biotechnol2013
23566431Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites.Skelet Muscle2013
24104757The anatomy of successful computational biology software.Nat Biotechnol2013
23950696Software for computing and annotating genomic ranges.PLoS Comput Biol2013
21917857An integrative genomic approach identifies p73 and p63 as activators of miR-200 microRNA family transcription.Nucleic Acids Res2012
22895193Recurrent R-spondin fusions in colon cancer.Nature2012
22499690Querying genomic databases: refining the connectivity map.Stat Appl Genet Mol Biol2012
22445365Genetic and epigenetic determinants of neurogenesis and myogenesis.Dev Cell2012
22267523The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients.Genome Res2012
22941189Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer.Nat Genet2012
23033341Genome and transcriptome sequencing of lung cancers reveal diverse mutational and splicing events.Genome Res2012
21917857An integrative genomic approach identifies p73 and p63 as activators of miR-200 microRNA family transcription.Nucleic Acids Res2012
22144163Analyzing biological data using R: methods for graphs and networks.Methods Mol Biol2012
22209328DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy.Dev Cell2012
23033341Genome and transcriptome sequencing of lung cancers reveal diverse mutational and splicing events.Genome Res2012
22941189Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer.Nat Genet2012
22895193Recurrent R-spondin fusions in colon cancer.Nature2012
22445365Genetic and epigenetic determinants of neurogenesis and myogenesis.Dev Cell2012
22499690Querying genomic databases: refining the connectivity map.Stat Appl Genet Mol Biol2012
22267523The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients.Genome Res2012
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Collaborators

Wolfgang Huber
Technische Universitat Munchen
Co-authored papers 13
Vincent J Carey
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 10
Michael Lawrence
Center for Cancer Research, Massachusetts General Hospital, Harvard Medical School
Co-authored papers 9
Deepayan Sarkar
All India Institute of Medical Sciences
Co-authored papers 7
Peter M Haverty
Co-authored papers 7
Zizhen Yao
Allen Institute for Brain Science
Co-authored papers 6
Martin Morgan
Roswell Park Comprehensive Cancer Center
Co-authored papers 5
Jianhua Zhang
University of Texas MD Anderson Cancer Center
Co-authored papers 4
Muneesh Tewari
University of Michigan ann arbor
Co-authored papers 4
Rachael K Parkin
Co-authored papers 4
Ryan R Brinkman
University of British Columbia
Co-authored papers 4
Florian Hahne
1 Preclinical Safety, Novartis Institutes for Biomedical Research
Co-authored papers 4
John D Minna
University of Texas Southwestern Medical Center at Dallas
Co-authored papers 3
Janet Kelso
Co-authored papers 3
Stacia K Wyman
Co-authored papers 3
Jerome Ritz
Dana-Farber Cancer Institute, Harvard Medical School, Brigham and Women's Hospital
Co-authored papers 3
Bf Francis Ouellette
Ontario Institute for Cancer Research
Co-authored papers 3
Steffen Durinck
Genentech Inc.
Co-authored papers 3
Robin Fo??
Sapienza University.
Co-authored papers 3
Rafael A Irizarry
Dana-Farber Cancer Institute
Co-authored papers 3
Herv?? Pag??s
Fred Hutchinson Cancer Research Center
Co-authored papers 3
Sandra Orchard
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 3
William Lee
Co-authored papers 3
Beatrice S Knudsen
University of Utah
Co-authored papers 2
Teresa K Attwood
Co-authored papers 2
Carole Goble
University of Manchester
Co-authored papers 2
Josef Spidlen
British Columbia Cancer Research Center
Co-authored papers 2
Gordon K Smyth
The University of Melbourne
Co-authored papers 2
Suchit Jhunjhunwala
Genentech Inc.
Co-authored papers 2
Lorna Richardson
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Release 1.2