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Author Details

Kent Shefchek
University of Colorado Anschutz Medical Campus
2012
15
10
PMIDPaper TitleJournal TitlePublished Year
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
36125173Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.Clin Transl Sci2022
35442193The Clinical Variant Analysis Tool: Analyzing the evidence supporting reported genomic variation in clinical practice.Genet Med2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
36125173Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.Clin Transl Sci2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
35442193The Clinical Variant Analysis Tool: Analyzing the evidence supporting reported genomic variation in clinical practice.Genet Med2022
33196056KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response.Patterns (N Y)2021
33724192Underrepresentation of Phenotypic Variability of 16p13.11 Microduplication Syndrome Assessed With an Online Self-Phenotyping Tool (Phenotypr): Cohort Study.J Med Internet Res2021
33196056KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response.Patterns (N Y)2021
33724192Underrepresentation of Phenotypic Variability of 16p13.11 Microduplication Syndrome Assessed With an Online Self-Phenotyping Tool (Phenotypr): Cohort Study.J Med Internet Res2021
31735951Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery.Database (Oxford)2019
31735951Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery.Database (Oxford)2019
29632381Plain-language medical vocabulary for precision diagnosis.Nat Genet2018
29632381Plain-language medical vocabulary for precision diagnosis.Nat Genet2018
27899636The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species.Nucleic Acids Res2017
27899636The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species.Nucleic Acids Res2017
27516611Navigating the Phenotype Frontier: The Monarch Initiative.Genetics2016
27516611Navigating the Phenotype Frontier: The Monarch Initiative.Genetics2016
26269093Use of model organism and disease databases to support matchmaking for human disease gene discovery.Hum Mutat2015
26269093Use of model organism and disease databases to support matchmaking for human disease gene discovery.Hum Mutat2015
23661595Genome sequences of 65 Helicobacter pylori strains isolated from asymptomatic individuals and patients with gastric cancer, peptic ulcer disease, or gastritis.Pathog Dis2013
23661595Genome sequences of 65 Helicobacter pylori strains isolated from asymptomatic individuals and patients with gastric cancer, peptic ulcer disease, or gastritis.Pathog Dis2013
22965080Genomic insights into the emerging human pathogen Mycobacterium massiliense.J Bacteriol2012
22965092Genome sequence of Enterobacter radicincitans DSM16656(T), a plant growth-promoting endophyte.J Bacteriol2012
22965080Genomic insights into the emerging human pathogen Mycobacterium massiliense.J Bacteriol2012
22965092Genome sequence of Enterobacter radicincitans DSM16656(T), a plant growth-promoting endophyte.J Bacteriol2012
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Collaborators

Melissa A Haendel
American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison
Co-authored papers 12
Melissa A Haendel
Co-authored papers 11
Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 9
Peter N Robinson
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 8
Julie A McMurry
University of Colorado - Anschutz Medical Campus
Co-authored papers 6
Nicole Vasilevsky
Critical Path Institute
Co-authored papers 6
Monica C Munoz-Torres
University of Colorado Anschutz Medical Campus
Co-authored papers 5
Nicole L Washington
Renaissance Computing Institute, University of North Carolina
Co-authored papers 5
Matthew H Brush
University of Colorado Anschutz Medical Campus
Co-authored papers 5
Sebastian K??hler
Division of Emergency Medicine University of Calgary Calgary Alberta Canada.
Co-authored papers 5
Nomi L Harris
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
Co-authored papers 5
Seth Carbon
Lawrence Berkeley National Laboratory
Co-authored papers 5
Damian Smedley
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 5
James P Balhoff
Renaissance Computing Institute, University of North Carolina
Co-authored papers 4
Tudor Groza
Perth Children's Hospital
Co-authored papers 4
Julius O B Jacobsen
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 4
Jean-Philippe Gourdine
Oregon Health & Science University
Co-authored papers 3
Tim Putman
University of Colorado
Co-authored papers 3
Mark E Engelstad
Oregon Health & Science University
Co-authored papers 3
Harry Hochheiser
University of Pittsburgh
Co-authored papers 3
Erin Foster
Oregon Health and Science University
Co-authored papers 3
Bryan Laraway
University of Colorado Anschutz Medical Campus
Co-authored papers 3
Suzanna E Lewis
Lawrence Berkeley National Laboratory
Co-authored papers 3
Jeremy Nguyen-Xuan
Lawrence Berkeley National Laboratory
Co-authored papers 3
Tiffany J Callahan
Columbia University
Co-authored papers 3
Deepak R Unni
Lawrence Berkeley National Laboratory
Co-authored papers 3
Kevin Schaper
University of Colorado Anschutz Medical Campus
Co-authored papers 2
Vida Ravanmehr
MD Anderson Cancer Center
Co-authored papers 2
Richard Bruskiewich
Delphinai Corporation
Co-authored papers 2
Catherine A Brownstein
Harvard Medical School.
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