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Author Details

Wenjin Jim Zheng
University of Texas Health Science Center at Houston
2004
54
15
PMIDPaper TitleJournal TitlePublished Year
36906851HSC-independent definitive hematopoiesis persists into adult life.Cell Rep2023
36906851HSC-independent definitive hematopoiesis persists into adult life.Cell Rep2023
37018650Prediction of Brain Metastases Development in Patients With Lung Cancer by Explainable Artificial Intelligence From Electronic Health Records.JCO Clin Cancer Inform2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37018650Prediction of Brain Metastases Development in Patients With Lung Cancer by Explainable Artificial Intelligence From Electronic Health Records.JCO Clin Cancer Inform2023
34370624Transcriptomic and Epigenetic Profiling of Fibroblasts in Idiopathic Pulmonary Fibrosis.Am J Respir Cell Mol Biol2022
35902132Reshaping the tumor microenvironment with oncolytic viruses, positive regulation of the immune synapse, and blockade of the immunosuppressive oncometabolic circuitry.J Immunother Cancer2022
35419584An evidence-based lexical pattern approach for quality assurance of Gene Ontology relations.Brief Bioinform2022
35401937A novel group of genes that cause endocrine resistance in breast cancer identified by dynamic gene expression analysis.Oncotarget2022
35190386Peripheral blood gene expression profiling shows predictive significance for response to mycophenolate in systemic sclerosis-related interstitial lung disease.Ann Rheum Dis2022
35141022Exploiting induced vulnerability to overcome PARPi resistance and clonal heterogeneity in BRCA mutant triple-negative inflammatory breast cancer.Am J Cancer Res2022
34370624Transcriptomic and Epigenetic Profiling of Fibroblasts in Idiopathic Pulmonary Fibrosis.Am J Respir Cell Mol Biol2022
35176131CNGPLD: case-control copy-number analysis using Gaussian process latent difference.Bioinformatics2022
35401937A novel group of genes that cause endocrine resistance in breast cancer identified by dynamic gene expression analysis.Oncotarget2022
35419584An evidence-based lexical pattern approach for quality assurance of Gene Ontology relations.Brief Bioinform2022
35902132Reshaping the tumor microenvironment with oncolytic viruses, positive regulation of the immune synapse, and blockade of the immunosuppressive oncometabolic circuitry.J Immunother Cancer2022
35190386Peripheral blood gene expression profiling shows predictive significance for response to mycophenolate in systemic sclerosis-related interstitial lung disease.Ann Rheum Dis2022
35176131CNGPLD: case-control copy-number analysis using Gaussian process latent difference.Bioinformatics2022
35141022Exploiting induced vulnerability to overcome PARPi resistance and clonal heterogeneity in BRCA mutant triple-negative inflammatory breast cancer.Am J Cancer Res2022
34177951Subgingival Microbiome and Specialized Pro-Resolving Lipid Mediator Pathway Profiles Are Correlated in Periodontal Inflammation.Front Immunol2021
34177951Subgingival Microbiome and Specialized Pro-Resolving Lipid Mediator Pathway Profiles Are Correlated in Periodontal Inflammation.Front Immunol2021
33795676Presence of complete murine viral genome sequences in patient-derived xenografts.Nat Commun2021
35330920Segmenting Thoracic Cavities with Neoplastic Lesions: A Head-to-head Benchmark with Fully Convolutional Neural Networks.ACM BCB2021
33795676Presence of complete murine viral genome sequences in patient-derived xenografts.Nat Commun2021
35330920Segmenting Thoracic Cavities with Neoplastic Lesions: A Head-to-head Benchmark with Fully Convolutional Neural Networks.ACM BCB2021
32341755Gene expression dynamic analysis reveals co-activation of Sonic Hedgehog and epidermal growth factor followed by dynamic silencing.Oncotarget2020
32078367Cancer Informatics for Cancer Centers (CI4CC): Building a Community Focused on Sharing Ideas and Best Practices to Improve Cancer Care and Patient Outcomes.JCO Clin Cancer Inform2020
32318854Evidence for craniofacial enhancer variation underlying nonsyndromic cleft lip and palate.Hum Genet2020
32341755Gene expression dynamic analysis reveals co-activation of Sonic Hedgehog and epidermal growth factor followed by dynamic silencing.Oncotarget2020
32151769A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets.J Biomed Inform2020
32205408Yeast Sphingolipid Phospholipase Gene <i>ISC1</i> Regulates the Spindle Checkpoint by a <i>CDC55</i>-Dependent Mechanism.Mol Cell Biol2020
33247935An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.Database (Oxford)2020
32918476A transformation-based method for auditing the IS-A hierarchy of biomedical terminologies in the Unified Medical Language System.J Am Med Inform Assoc2020
32738030Virome assembly and annotation in brain tissue based on next-generation sequencing.Cancer Med2020
32735224Asthma Exacerbation Prediction and Risk Factor Analysis Based on a Time-Sensitive, Attentive Neural Network: Retrospective Cohort Study.J Med Internet Res2020
32078367Cancer Informatics for Cancer Centers (CI4CC): Building a Community Focused on Sharing Ideas and Best Practices to Improve Cancer Care and Patient Outcomes.JCO Clin Cancer Inform2020
33247935An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.Database (Oxford)2020
32918476A transformation-based method for auditing the IS-A hierarchy of biomedical terminologies in the Unified Medical Language System.J Am Med Inform Assoc2020
32738030Virome assembly and annotation in brain tissue based on next-generation sequencing.Cancer Med2020
32735224Asthma Exacerbation Prediction and Risk Factor Analysis Based on a Time-Sensitive, Attentive Neural Network: Retrospective Cohort Study.J Med Internet Res2020
32151769A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets.J Biomed Inform2020
32205408Yeast Sphingolipid Phospholipase Gene <i>ISC1</i> Regulates the Spindle Checkpoint by a <i>CDC55</i>-Dependent Mechanism.Mol Cell Biol2020
32318854Evidence for craniofacial enhancer variation underlying nonsyndromic cleft lip and palate.Hum Genet2020
30649296Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis.Database (Oxford)2019
30649296Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis.Database (Oxford)2019
30961579Time-sensitive clinical concept embeddings learned from large electronic health records.BMC Med Inform Decis Mak2019
30961579Time-sensitive clinical concept embeddings learned from large electronic health records.BMC Med Inform Decis Mak2019
29467363Enhancing Hi-C data resolution with deep convolutional neural network HiCPlus.Nat Commun2018
29908902A study of generalizability of recurrent neural network-based predictive models for heart failure onset risk using a large and heterogeneous EHR data set.J Biomed Inform2018
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Collaborators

Lam C Tsoi
Co-authored papers 9
Hulin Wu
School of Public Health, The University of Texas Health Science Center at Houston
Co-authored papers 6
Hua Xu
Yale University
Co-authored papers 4
Tingting Qin
Co-authored papers 4
Hua Xu
The University of Texas Health Science Center at Houston
Co-authored papers 4
Vahed Maroufy
UTHealth School of Public Health
Co-authored papers 4
Nan Deng
Cedars-Sinai Medical Center
Co-authored papers 4
Laila Rasmy
the University of Texas Health Science Center at Houston
Co-authored papers 4
Degui Zhi
University of Texas Health Science Center at Houston
Co-authored papers 4
Yonghui Wu
University of Florida
Co-authored papers 3
Cui Tao
The University of Texas Health Science Center at Houston
Co-authored papers 3
Zhongming Zhao
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 3
Yang Xiang
The University of Texas Health Science Center at Houston
Co-authored papers 2
Zihao Yuan
Auburn University
Co-authored papers 2
David J H Shih
University of Texas MD Anderson Cancer Center Houston
Co-authored papers 2
Braja Gopal Patra
Cornell University
Co-authored papers 2
Licong Cui
The University of Texas Health Science Center at Houston
Co-authored papers 2
Kirk Roberts
Georgia Institute of Technology, National Library of Medicine, University of Texas Health Science Center at Houston, University of Texas at Dallas
Co-authored papers 2
Andrew B Lawson
Co-authored papers 2
Zhiqiang An
Zhengzhou University
Co-authored papers 2
Shiaw-Yih Lin
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Canglin Wu
TechWave International. Inc.
Co-authored papers 2
Xiaoqian Jiang
Carnegie Mellon University, The University of Texas Health Science Center at Houston, University of California San Diego
Co-authored papers 2
Yaoyun Zhang
The University of Texas School of Biomedical Informatics
Co-authored papers 2
Ningyan Zhang
Stem Cell Translational Research Center of Tongji Hospital, Tongji University
Co-authored papers 2
Luca Giancardo
University of Texas Health Science Center at Houston
Co-authored papers 1
Ping Zhu
McGovern Medical School, The University of Texas Health Science Center at Houston
Co-authored papers 1
Jeremy A Miller
Allen Institute for Brain Science
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Release 1.2