Author details

Full Name

Sun Kim

Affiliation

ORCID

Career Start Year

2008

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37524869	AIVariant: a deep learning-based somatic variant detector for highly contaminated tumor samples.		2023
37322032	Biomedical knowledge graph learning for drug repurposing by extending guilt-by-association to multiple layers.		2023
36413480	Generative Modeling to Predict Multiple Suitable Conditions for Chemical Reactions.	Journal of Chemical Information and Modeling	2022
34907266	Subnetwork representation learning for discovering network biomarkers in predicting lymph node metastasis in early oral cancer.	Scientific Reports	2021
33767203	NLM-Chem, a new resource for chemical entity recognition in PubMed full text literature.	Sci Data	2021
32719318	Homologous repair deficiency score for identifying breast cancers with defective DNA damage response.	Scientific Reports	2020
32324731	BioConceptVec: Creating and evaluating literature-based biomedical concept embeddings on a large scale.	PLoS Comput Biol	2020
32349758	Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical records.	BMC Med Inform Decis Mak	2020
32383756	TeamTat: a collaborative text annotation tool.	Nucleic Acids Res	2020
33083825	Better synonyms for enriching biomedical search.	J Am Med Inform Assoc	2020
31020319	LitSense: making sense of biomedical literature at sentence level.	Nucleic Acids Res	2019
30689846	Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.	Database (Oxford)	2019
29788413	ezTag: tagging biomedical concepts via interactive learning.	Nucleic Acids Res	2018
29893755	PubMed Phrases, an open set of coherent phrases for searching biomedical literature.	Sci Data	2018
30012087	Discovering themes in biomedical literature using a projection-based algorithm.	BMC Bioinformatics	2018
28077563	The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.	Database (Oxford)	2017
28986328	Bridging the gap: Incorporating a semantic similarity measure for effectively mapping PubMed queries to documents.	J Biomed Inform	2017
27589962	BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.	Database (Oxford)	2016
27288493	Meshable: searching PubMed abstracts by utilizing MeSH and MeSH-derived topical terms.	Bioinformatics	2016
27515823	BioC viewer: a web-based tool for displaying and merging annotations in BioC.	Database (Oxford)	2016
25796456	Extracting drug-drug interactions from literature using a rich feature-based linear kernel approach.	J Biomed Inform	2015
25887671	Identifying named entities from PubMed for enriching semantic categories.	BMC Bioinformatics	2015
25052701	Assisting manual literature curation for protein-protein interactions using BioQRator.	Database (Oxford)	2014
28758138	Author Name Disambiguation for PubMed.	J Assoc Inf Sci Technol	2014
25075115	Retro: concept-based clustering of biomedical topical sets.	Bioinformatics	2014
22199390	PIE the search: searching PubMed literature for protein interaction information.	Bioinformatics	2012
23046528	Thematic clustering of text documents using an EM-based approach.	J Biomed Semantics	2012
23160415	Prioritizing PubMed articles for the Comparative Toxicogenomic Database utilizing semantic information.	Database (Oxford)	2012
22151252	Classifying protein-protein interaction articles using word and syntactic features.	BMC Bioinformatics	2011
22151929	The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.	BMC Bioinformatics	2011
18508809	PIE: an online prediction system for protein-protein interactions from text.	Nucleic Acids Res	2008
18834497	Introducing meta-services for biomedical information extraction.	Genome Biol	2008