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Author Details

Mark J Dunning
The Medical School, The University of Sheffield
2007
42
27
PMIDPaper TitleJournal TitlePublished Year
36400790Hyaluronan nanoscale clustering and Hyaluronan synthase 2 expression are linked to the invasion of child fibroblasts and infantile fibrosarcoma in vitro and in vivo.Sci Rep2022
36992918SpheroidAnalyseR-an online platform for analyzing data from 3D spheroids or organoids grown in 96-well plates.J Biol Methods2022
34069294Distinct Concentration-Dependent Molecular Pathways Regulate Bone Cell Responses to Cobalt and Chromium Exposure from Joint Replacement Prostheses.Int J Mol Sci2021
32212285The failure of microglia to digest developmental apoptotic cells contributes to the pathology of RNASET2-deficient leukoencephalopathy.Glia2020
30426503Identification and validation of DOCK4 as a potential biomarker for risk of bone metastasis development in patients with early breast cancer.J Pathol2019
29437778Identification of potential therapeutic targets in prostate cancer through a cross-species approach.EMBO Mol Med2018
30400059Neuroendocrine differentiation of prostate cancer leads to PSMA suppression.Endocr Relat Cancer2018
27815082Translating a Prognostic DNA Genomic Classifier into the Clinic: Retrospective Validation in 563 Localized Prostate Tumors.Eur Urol2017
28292578Corrigendum to "Integration of Copy Number and Transcriptomics Provides Risk Stratification in Prostate Cancer: A Discovery and Validation Cohort Study" [EBioMedicine 2 (9) (2015) 1133-1144].EBioMedicine2017
28286059Mining Human Prostate Cancer Datasets: The "camcAPP" Shiny App.EBioMedicine2017
26950096Gene regulatory mechanisms underpinning prostate cancer susceptibility.Nat Genet2016
26572708The Early Effects of Rapid Androgen Deprivation on Human Prostate Cancer.Eur Urol2016
25169931A tumor DNA complex aberration index is an independent predictor of survival in breast and ovarian cancer.Mol Oncol2015
26501111Integration of copy number and transcriptomics provides risk stratification in prostate cancer: A discovery and validation cohort study.EBioMedicine2015
258538005-hydroxymethylcytosine marks promoters in colon that resist DNA hypermethylation in cancer.Genome Biol2015
25560400HES5 silencing is an early and recurrent change in prostate tumourigenesis.Endocr Relat Cancer2015
24952744Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis.Nat Genet2014
25456371Tumour genomic and microenvironmental heterogeneity for integrated prediction of 5-year biochemical recurrence of prostate cancer: a retrospective cohort study.Lancet Oncol2014
25164602Genome-driven integrated classification of breast cancer validated in over 7,500 samples.Genome Biol2014
23484797Analysis of circulating tumor DNA to monitor metastatic breast cancer.N Engl J Med2013
24297747Loss of centrioles causes chromosomal instability in vertebrate somatic cells.J Cell Biol2013
22217937Differential oestrogen receptor binding is associated with clinical outcome in breast cancer.Nature2012
23100629Quantitative image analysis of cellular heterogeneity in breast tumors complements genomic profiling.Sci Transl Med2012
22912679Calling sample mix-ups in cancer population studies.PLoS One2012
22522925The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups.Nature2012
22513257Effects of BRCA2 cis-regulation in normal breast and cancer risk amongst BRCA2 mutation carriers.Breast Cancer Res2012
21337521ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium.EMBO Mol Med2011
22144879BeadArray expression analysis using bioconductor.PLoS Comput Biol2011
19923232A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data.Nucleic Acids Res2010
20688273The importance of platform annotation in interpreting microarray data.Lancet Oncol2010
20925945The cost of reducing starting RNA quantity for Illumina BeadArrays: a bead-level dilution experiment.BMC Genomics2010
20423502Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data.BMC Bioinformatics2010
19153169Considerations for the processing and analysis of GoldenGate-based two-colour Illumina platforms.Stat Methods Med Res2009
19995423The pitfalls of platform comparison: DNA copy number array technologies assessed.BMC Genomics2009
18254947Statistical issues in the analysis of Illumina data.BMC Bioinformatics2008
18953044BASH: a tool for managing BeadArray spatial artefacts.Bioinformatics2008
18588681PMC42, a breast progenitor cancer cell line, has normal-like mRNA and microRNA transcriptomes.Breast Cancer Res2008
18710543Spike-in validation of an Illumina-specific variance-stabilizing transformation.BMC Res Notes2008
17289997Relative impact of nucleotide and copy number variation on gene expression phenotypes.Science2007
17873874Population genomics of human gene expression.Nat Genet2007
17586828beadarray: R classes and methods for Illumina bead-based data.Bioinformatics2007
17922911MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype.Genome Biol2007
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Collaborators

Andy G Lynch
University of St Andrews
Co-authored papers 20
Simon Tavar??
Irving Institute for Cancer Dynamics, Columbia University
Co-authored papers 15
Carlos Caldas
Cancer Research UK Cambridge Institute, University of Cambridge
Co-authored papers 14
Alastair D Lamb
University of Oxford
Co-authored papers 10
Christina Curtis
Stanford University School of Medicine
Co-authored papers 9
David E Neal
University of Oxford, John Radcliffe Hospital
Co-authored papers 8
Helen J Ross
Mayo Clinic
Co-authored papers 8
Matthew E Ritchie
The University of Melbourne
Co-authored papers 7
Silvia Halim
University of Oxford
Co-authored papers 6
Samuel Aparicio
University of British Columbia
Co-authored papers 6
Anne Y Warren
Cambridge University Hospitals National Health Service Foundation Trust
Co-authored papers 6
Oscar M Rueda
University of Cambridge
Co-authored papers 6
Ian G Mills
Queen's University Belfast
Co-authored papers 5
Hayley C Whitaker
University College London
Co-authored papers 4
Jonathan Kay
University College London
Co-authored papers 4
Colin S Cooper
Norwich Medical School, University of East Anglia
Co-authored papers 4
Henrik Gr??nberg
Karolinska Institute
Co-authored papers 4
Lars Egevad
Karolinska Institute
Co-authored papers 4
Johan Lindberg
Karolinska Institute
Co-authored papers 4
Charlie E Massie
University of Cambridge
Co-authored papers 4
Rosalind A Eeles
The Institute of Cancer Research
Co-authored papers 3
Jason S Carroll
Co-authored papers 3
James D Brenton
CRUK Cambridge Institute, University of Cambridge
Co-authored papers 3
Nimish Shah
Cambridge University Hospitals NHS Foundation Trust
Co-authored papers 3
Emilie Lalonde
University of Pennsylvania
Co-authored papers 3
Paul C Boutros
University of California los angeles
Co-authored papers 3
Hayley J Luxton
University College London
Co-authored papers 2
Andrew E Teschendorff
UCL Cancer Institute, University College London
Co-authored papers 2
Emmanouil T Dermitzakis
University of Geneva
Co-authored papers 2
Panos Deloukas
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 2
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