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Author Details

Amie J Eisfeld
Influenza Research Institute, University of Wisconsin-Madison
2006
37
25
PMIDPaper TitleJournal TitlePublished Year
37812908Characterization of highly pathogenic clade 2.3.4.4b H5N1 mink influenza viruses.EBioMedicine2023
34051754Hypergraph models of biological networks to identify genes critical to pathogenic viral response.BMC Bioinformatics2021
34140350Characterization of a new SARS-CoV-2 variant that emerged in Brazil.Proc Natl Acad Sci U S A2021
31369554Serological analysis of Ebola virus survivors and close contacts in Sierra Leone: A cross-sectional study.PLoS Negl Trop Dis2019
31616667The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections.Front Cell Dev Biol2019
29339515MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape.Proc Natl Acad Sci U S A2018
28777788Calculated risk: a new single-nucleotide polymorphism linked to severe influenza disease.Nat Med2017
28091625MPLEx: a method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling.Analyst2017
29154144Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis.Cell Host Microbe2017
26867183Integrated Omics Analysis of Pathogenic Host Responses during Pandemic H1N1 Influenza Virus Infection: The Crucial Role of Lipid Metabolism.Cell Host Microbe2016
27663205The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus.BMC Syst Biol2016
27403523Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens.PLoS Comput Biol2016
27279525Ebola Virus Stability Under Hospital and Environmental Conditions.J Infect Dis2016
26801959Multi-task consensus clustering of genome-wide transcriptomes from related biological conditions.Bioinformatics2016
25417656At the centre: influenza A virus ribonucleoproteins.Nat Rev Microbiol2015
26046528An Ultrasensitive Mechanism Regulates Influenza Virus-Induced Inflammation.PLoS Pathog2015
24606692Protection of ferrets from pulmonary injury due to H1N1 2009 influenza virus infection: immunopathology tractable by sphingosine-1-phosphate 1 receptor agonist therapy.Virology2014
25977790A comprehensive collection of systems biology data characterizing the host response to viral infection.Sci Data2014
25402615The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease.Nat Biotechnol2014
25321410Influenza A virus isolation, culture and identification.Nat Protoc2014
24846384Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses.mBio2014
24922324Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts.RNA Biol2014
23300433Adding protein context to the human protein-protein interaction network to reveal meaningful interactions.PLoS Comput Biol2013
24088197A comprehensive map of the influenza A virus replication cycle.BMC Syst Biol2013
23842494Characterization of H7N9 influenza A viruses isolated from humans.Nature2013
23895213Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice.BMC Syst Biol2013
23935999A network integration approach to predict conserved regulators related to pathogenicity of influenza and SARS-CoV respiratory viruses.PLoS One2013
22031950The TLR4-TRIF pathway protects against H5N1 influenza virus infection.J Virol2012
22937776Integrated network analysis reveals a novel role for the cell cycle in 2009 pandemic influenza virus-induced inflammation in macaque lungs.BMC Syst Biol2012
22491448Integrated clinical, pathologic, virologic, and transcriptomic analysis of H5N1 influenza virus-induced viral pneumonia in the rhesus macaque.J Virol2012
21375734Toll-like receptor pre-stimulation protects mice against lethal infection with highly pathogenic influenza viruses.Virol J2011
22074594Conserved host response to highly pathogenic avian influenza virus infection in human cell culture, mouse and macaque model systems.BMC Syst Biol2011
21865398Host regulatory network response to infection with highly pathogenic H5N1 avian influenza virus.J Virol2011
21525351RAB11A is essential for transport of the influenza virus genome to the plasma membrane.J Virol2011
21752912Human immunodeficiency virus rev-binding protein is essential for influenza a virus replication and promotes genome trafficking in late-stage infection.J Virol2011
17567702Downregulation of class I major histocompatibility complex surface expression by varicella-zoster virus involves open reading frame 66 protein kinase-dependent and -independent mechanisms.J Virol2007
16439528Phosphorylation of the varicella-zoster virus (VZV) major transcriptional regulatory protein IE62 by the VZV open reading frame 66 protein kinase.J Virol2006
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Collaborators

Yoshihiro Kawaoka
Influenza Research Institute, University of Wisconsin
Co-authored papers 33
Gabriele Neumann
Influenza Research Institute, University of Wisconsin-Madison
Co-authored papers 17
Katrina M Waters
Pacific Northwest National Laboratory
Co-authored papers 13
Michael G Katze
University of Washington
Co-authored papers 11
Ralph S Baric
University of North Carolina
Co-authored papers 10
Bobbie-Jo M Webb-Robertson
Pacific Northwest National Laboratory
Co-authored papers 8
Thomas O Metz
Pacific Northwest National Laboratory
Co-authored papers 8
Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 8
Amy C Sims
The University of North Carolina at Chapel Hill
Co-authored papers 7
Laurence Josset
Institut des Agents Infectieux, Infective Agents Institute, North Hospital Network
Co-authored papers 7
Chengjun Li
Harbin Veterinary Research Institute
Co-authored papers 7
Lisa E Gralinski
University of North Carolina at Chapel Hill
Co-authored papers 7
Susan C Tilton
Oregon State University
Co-authored papers 6
Shufang Fan
Influenza Research Institute, University of Wisconsin
Co-authored papers 6
Hugh D Mitchell
Pacific Northwest National Laboratory (PNNL)
Co-authored papers 6
Jason E McDermott
Pacific Northwest National Laboratory
Co-authored papers 6
Masato Hatta
Influenza Research Institute, University of Wisconsin-Madison
Co-authored papers 5
Kelly G Stratton
Pacific Northwest National Laboratory
Co-authored papers 5
Jennifer Tisoncik-Go
Center for Innate Immunity and Immune Disease, University of Washington
Co-authored papers 4
Karl K Weitz
Pacific Northwest National Laboratory
Co-authored papers 4
Anil K Shukla
Pacific Northwest National Laboratory
Co-authored papers 4
Athena A Schepmoes
Pacific Northwest National Laboratory
Co-authored papers 4
Vineet D Menachery
University of Texas Medical Branch
Co-authored papers 4
Richard Green
Center for Innate Immunity and Immune Disease, University of Washington
Co-authored papers 4
Hiroaki Kitano
Co-authored papers 4
Shannon K McWeeney
Oregon Health & Science University, University of California Berkeley
Co-authored papers 4
Nicolas Tchitchek
Sorbonne University INSERM
Co-authored papers 4
Jean Chang
Center for Innate Immunity and Immune Disease, University of Washington
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Jennifer E Kyle
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