Author details

Full Name

Deepak K Sharma

Affiliation

Mayo Clinic

ORCID

Career Start Year

1997

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37918622	Shape Expressions (ShEx) schemas for the FHIR R5 specification.	J Biomed Inform	2023
36089199	FHIR-Ontop-OMOP: Building clinical knowledge graphs in FHIR RDF with the OMOP Common data Model.	J Biomed Inform	2022
32134686	Developing an FHIR-Based Computational Pipeline for Automatic Population of Case Report Forms for Colorectal Cancer Clinical Trials Using Electronic Health Records.	JCO Clin Cancer Inform	2020
32477698	Developing a FHIR-based Framework for Phenome Wide Association Studies: A Case Study with A Pan-Cancer Cohort.	AMIA Jt Summits Transl Sci Proc	2020
30835125	Sulfonamides Are an Overlooked Class of Electron Donors in Luminogenic Luciferins and Fluorescent Dyes.	Org Lett	2019
30045832	The D2Refine Platform for the Standardization of Clinical Research Study Data Dictionaries: Usability Study.	JMIR Hum Factors	2018
28815140	D2Refine: A Platform for Clinical Research Study Data Element Harmonization and Standardization.	AMIA Jt Summits Transl Sci Proc	2017
28269909	Standardized Representation of Clinical Study Data Dictionaries with CIMI Archetypes.	AMIA Annu Symp Proc	2017
28213144	Modeling and validating HL7 FHIR profiles using semantic web Shape Expressions (ShEx).	J Biomed Inform	2017
29295227	A Consensus-Based Approach for Harmonizing the OHDSI Common Data Model with HL7 FHIR.	Stud Health Technol Inform	2017
29039673	Rapid Access to a Broad Range of 6'-Substituted Firefly Luciferin Analogues Reveals Surprising Emitters and Inhibitors.	Org Lett	2017
28583204	Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies.	J Biomed Semantics	2017
25540680	A use case study on late stent thrombosis for ontology-based temporal reasoning and analysis.	J Biomed Semantics	2014
23268487	A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data.	J Am Med Inform Assoc	2013
23867104	Semantator: semantic annotator for converting biomedical text to linked data.	J Biomed Inform	2013
22195199	Application of a temporal reasoning framework tool in analysis of medical device adverse events.	AMIA Annu Symp Proc	2011
16672382	Distinct mechanisms of clathrin-independent endocytosis have unique sphingolipid requirements.	Mol Biol Cell	2006
15668297	Ultrastructural identification of uncoated caveolin-independent early endocytic vehicles.	J Cell Biol	2005
16166299	The glycosphingolipid, lactosylceramide, regulates beta1-integrin clustering and endocytosis.	Cancer Res	2005
16288034	Transforming growth factor-beta activation of phosphatidylinositol 3-kinase is independent of Smad2 and Smad3 and regulates fibroblast responses via p21-activated kinase-2.	Cancer Res	2005
15972801	Protein transduction of Rab9 in Niemann-Pick C cells reduces cholesterol storage.	FASEB J	2005
15107466	Selective stimulation of caveolar endocytosis by glycosphingolipids and cholesterol.	Mol Biol Cell	2004
15292453	Elevated endosomal cholesterol levels in Niemann-Pick cells inhibit rab4 and perturb membrane recycling.	Mol Biol Cell	2004
12482757	Glycosphingolipids internalized via caveolar-related endocytosis rapidly merge with the clathrin pathway in early endosomes and form microdomains for recycling.	J Biol Chem	2003
12070301	Rab proteins mediate Golgi transport of caveola-internalized glycosphingolipids and correct lipid trafficking in Niemann-Pick C cells.	J Clin Invest	2002
12029085	Processing and trafficking of Leishmania mexicana GP63. Analysis using GP18 mutants deficient in glycosylphosphatidylinositol protein anchoring.	J Biol Chem	2002
11042127	Soluble GPI8 restores glycosylphosphatidylinositol anchoring in a trypanosome cell-free system depleted of lumenal endoplasmic reticulum proteins.	Biochem J	2000
10571022	The GPI biosynthetic pathway as a therapeutic target for African sleeping sickness.	Biochim Biophys Acta	1999
10347210	A cell-free assay for glycosylphosphatidylinositol anchoring in African trypanosomes. Demonstration of a transamidation reaction mechanism.	J Biol Chem	1999
10329729	Segregation of glycosylphosphatidylinositol biosynthetic reactions in a subcompartment of the endoplasmic reticulum.	J Biol Chem	1999
10545104	Selective inhibitors of the glycosylphosphatidylinositol biosynthetic pathway of Trypanosoma brucei.	EMBO J	1999
10089216	Differences between the trypanosomal and human GlcNAc-PI de-N-acetylases of glycosylphosphatidylinositol membrane anchor biosynthesis.	Glycobiology	1999
9359849	Substrate specificity of the N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase of glycosylphosphatidylinositol membrane anchor biosynthesis in African trypanosomes and human cells.	Biochem J	1997
9362481	Parasite and mammalian GPI biosynthetic pathways can be distinguished using synthetic substrate analogues.	EMBO J	1997
9291110	Early steps in glycosylphosphatidylinositol biosynthesis in Leishmania major.	Biochem J	1997

1 - 35 of 35

Sarika Chaudhary

Bennett University

Career Start Year 2009

Number of shared co-authors 0

Robert J A Goode

Monash Biomedicine Discovery Institute, Monash University

Career Start Year 2008

Number of shared co-authors 0

Siddhesh S Kamat

Indian Institute of Science Education and Research Pune

Career Start Year 2006

Number of shared co-authors 0

Dhiraj Kumar

Johns Hopkins University School of Medicine

Career Start Year 2004

Number of shared co-authors 0

Yi-Ting Wang

McGill Research Centre for Studies in Aging

Career Start Year 2003

Number of shared co-authors 0

Matthew H Brush

University of Colorado Anschutz Medical Campus

Career Start Year 2003

Number of shared co-authors 5

Kieran Wynne

University College Dublin

Career Start Year 2002

Number of shared co-authors 0

Leigh C Carmody

Center for the Science of Therapeutics, Broad Institute of MIT and Harvard

Career Start Year 2002

Number of shared co-authors 1

Rabah Soliymani

Meilahti Clinical Proteomics Core Facility, University of Helsinki

Career Start Year 1999

Number of shared co-authors 0

Giselle M Knudsen

Department of Pharmaceutical Chemistry, University of California san francisco

Career Start Year 1999

Number of shared co-authors 0

Siddharth Pratap

Meharry Medical College

Career Start Year 1999

Number of shared co-authors 1

Guo-Qiang Zhang

China-Japan Friendship Hospital

Career Start Year 1997

Number of shared co-authors 1

Damarys Loew

Institut Curie, PSL Research University

Career Start Year 1996

Number of shared co-authors 0

Bj??rn G Voldborg

Technical University of Denmark

Career Start Year 1995

Number of shared co-authors 0

Byung-Kwon Choi

Baylor College of Medicine

Career Start Year 1995

Number of shared co-authors 0

Paul de Figueiredo

Texas A&M University, College Station

Career Start Year 1995

Number of shared co-authors 0

Thuy Nguyen

Mayo Clinic

Career Start Year 1993

Number of shared co-authors 1

Carolyn R Bertozzi

Stanford University

Career Start Year 1992

Number of shared co-authors 0

Gyorgy Babnigg

Argonne National Laboratory

Career Start Year 1992

Number of shared co-authors 0

Alessandro Datti

University of Perugia

Career Start Year 1991

Number of shared co-authors 0

Christopher P Austin

St. George's University Medical School

Career Start Year 1990

Number of shared co-authors 3

Richard R Drake

Medical University of South Carolina

Career Start Year 1989

Number of shared co-authors 0

Shankar Subramaniam

University of California

Career Start Year 1989

Number of shared co-authors 0

Andreas Hofmann

Heidelberg University

Career Start Year 1989

Number of shared co-authors 0

Phuong Nguyen

Hoag Memorial Hospital Presbyterian

Career Start Year 1983

Number of shared co-authors 0

Rohan D Teasdale

The University of Queensland

Career Start Year 1979

Number of shared co-authors 0

Brian D Athey

University of Michigan Medical School ann arbor

Career Start Year 1977

Number of shared co-authors 1

Michael N Liebman

Iowa State University

Career Start Year 1974

Number of shared co-authors 1

John N Weinstein

The University of Texas MD Anderson Cancer Center

Career Start Year 1968

Number of shared co-authors 1

Young-Ki Paik

College of Life Sciences and Biotechnology, Yonsei University

Career Start Year 1962

Number of shared co-authors 0

row(s) 1 - 30 of 30

Guoqian Jiang

Mayo Clinic Rochester Minnesota USA.

Co-authored papers 10

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Co-authored papers 6

Eric Prud'hommeaux

Massachusetts Institutes of Technology

Co-authored papers 6

Harold R Solbrig

Johns Hopkins University

Co-authored papers 5

Cui Tao

The University of Texas Health Science Center at Houston

Co-authored papers 5

Nansu Zong

Mayo Clinic