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Author Details

Yaroslav O Halchenko
Center for Open Neuroscience, Dartmouth College
2007
51
23
PMIDPaper TitleJournal TitlePublished Year
37744469The Past, Present, and Future of the Brain Imaging Data Structure (BIDS).ArXiv2024
37744469The Past, Present, and Future of the Brain Imaging Data Structure (BIDS).ArXiv2024
36865282OME-Zarr: a cloud-optimized bioimaging file format with international community support.bioRxiv2023
37857685A comparison of neuroelectrophysiology databases.Sci Data2023
37645999A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.bioRxiv2023
37694123The PyMVPA BIDS-App: a robust multivariate pattern analysis pipeline for fMRI data.Front Neurosci2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37386112Align with the NMIND consortium for better neuroimaging.Nat Hum Behav2023
36865282OME-Zarr: a cloud-optimized bioimaging file format with international community support.bioRxiv2023
37426452A Comparison of Neuroelectrophysiology Databases.ArXiv2023
37857685A comparison of neuroelectrophysiology databases.Sci Data2023
37694123The PyMVPA BIDS-App: a robust multivariate pattern analysis pipeline for fMRI data.Front Neurosci2023
37645999A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.bioRxiv2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37386112Align with the NMIND consortium for better neuroimaging.Nat Hum Behav2023
37426452A Comparison of Neuroelectrophysiology Databases.ArXiv2023
35264938The Relationship Between Default Mode and Dorsal Attention Networks Is Associated With Depressive Disorder Diagnosis and the Strength of Memory Representations Acquired Prior to the Resting State Scan.Front Hum Neurosci2022
35516811Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.Front Neurosci2022
36100172Open and reproducible neuroimaging: From study inception to publication.Neuroimage2022
36220840Working memory updating in individuals with bipolar and unipolar depression: fMRI study.Transl Psychiatry2022
36456786TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models.Nat Methods2022
35264938The Relationship Between Default Mode and Dorsal Attention Networks Is Associated With Depressive Disorder Diagnosis and the Strength of Memory Representations Acquired Prior to the Resting State Scan.Front Hum Neurosci2022
35516811Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.Front Neurosci2022
36456786TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models.Nat Methods2022
36100172Open and reproducible neuroimaging: From study inception to publication.Neuroimage2022
36220840Working memory updating in individuals with bipolar and unipolar depression: fMRI study.Transl Psychiatry2022
34455188Aberrant levels of cortical myelin distinguish individuals with depressive disorders from healthy controls.Neuroimage Clin2021
36504549In defense of decentralized research data management.Neuroforum2021
33522661The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data.Hum Brain Mapp2021
33824408White matter abnormalities in adults with bipolar disorder type-II and unipolar depression.Sci Rep2021
34455188Aberrant levels of cortical myelin distinguish individuals with depressive disorders from healthy controls.Neuroimage Clin2021
34658334The OpenNeuro resource for sharing of neuroscience data.Elife2021
35004227Protocol for a machine learning algorithm predicting depressive disorders using the T1w/T2w ratio.MethodsX2021
34584100The "Narratives" fMRI dataset for evaluating models of naturalistic language comprehension.Sci Data2021
36504549In defense of decentralized research data management.Neuroforum2021
33522661The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data.Hum Brain Mapp2021
33824408White matter abnormalities in adults with bipolar disorder type-II and unipolar depression.Sci Rep2021
35004227Protocol for a machine learning algorithm predicting depressive disorders using the T1w/T2w ratio.MethodsX2021
34584100The "Narratives" fMRI dataset for evaluating models of naturalistic language comprehension.Sci Data2021
34658334The OpenNeuro resource for sharing of neuroscience data.Elife2021
32514178Analysis of task-based functional MRI data preprocessed with fMRIPrep.Nat Protoc2020
33447378A new virtue of phantom MRI data: explaining variance in human participant data.F1000Res2020
32514178Analysis of task-based functional MRI data preprocessed with fMRIPrep.Nat Protoc2020
33447378A new virtue of phantom MRI data: explaining variance in human participant data.F1000Res2020
30792636Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging.Front Neuroinform2019
32775955PyBIDS: Python tools for BIDS datasets.J Open Source Softw2019
30792636Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging.Front Neuroinform2019
32775955PyBIDS: Python tools for BIDS datasets.J Open Source Softw2019
29867327Neural Responses to Naturalistic Clips of Behaving Animals in Two Different Task Contexts.Front Neurosci2018
29867327Neural Responses to Naturalistic Clips of Behaving Animals in Two Different Task Contexts.Front Neurosci2018
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Collaborators

Michael Hanke
Institute of Neuroscience and Medicine, Research Center Julich
Co-authored papers 18
Satrajit S Ghosh
Boston University, Harvard Medical School, Kent Ridge Digital Laboratories, Massachusetts Institute of Technology, National University of Singapore
Co-authored papers 14
Satrajit S Ghosh
Co-authored papers 13
Russell A Poldrack
Stanford University
Co-authored papers 12
Jyothi S Guntupalli
Dartmouth College
Co-authored papers 9
Krzysztof J Gorgolewski
Stanford University
Co-authored papers 9
Christopher J Markiewicz
Stanford University
Co-authored papers 8
Jean-Baptiste Poline
McGill University
Co-authored papers 7
David B Keator
Change Your Brain Change Your Life Foundation
Co-authored papers 5
Gregory Kiar
Center for Data Analytics, Child Mind Institute
Co-authored papers 4
Mathias Goncalves
Stanford University
Co-authored papers 4
Taylor Salo
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 4
Ross W Blair
Stanford University
Co-authored papers 4
Matteo Visconti di Oleggio Castello
Dartmouth College
Co-authored papers 4
Alejandro de la Vega
The University of Texas at Austin
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Oscar Esteban
Lausanne University Hospital and University of Lausanne
Co-authored papers 4
Camille Maumet
CNRS, Inserm
Co-authored papers 4
Dora Hermes
Mayo Clinic
Co-authored papers 3
Franco Pestilli
The University of Texas at Austin
Co-authored papers 3
Cyril R Pernet
Neurobiology Research Unit, Copenhagen University Hospital
Co-authored papers 3
Tal Yarkoni
Google X. Mountain View
Co-authored papers 3
Stefan Appelhoff
Max Planck Institute for Human Development
Co-authored papers 3
Benjamin Dichter
Stanford University
Co-authored papers 3
Samuel A Nastase
Princeton Neuroscience Institute, Princeton University
Co-authored papers 3
Elizabeth DuPre
Stanford University
Co-authored papers 3
Robert Oostenveld
Donders Institute for Brain, Radboud University Nijmegen
Co-authored papers 3
Peer Herholz
Montreal Neurological Institute, McGill University
Co-authored papers 3
Guiomar Niso
Instituto Cajal
Co-authored papers 3
Vince D Calhoun
Georgia Institute of Technology, Emory University
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Thomas E Nichols
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Release 1.2