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Author Details

Toma Tebaldi
Yale Comprehensive Cancer Center, Yale University School of Medicine
2009
55
22
PMIDPaper TitleJournal TitlePublished Year
37250782Visualizing gene expression changes in time, space, and single cells with <i>expressyouRcell</i>.iScience2023
37742191ALKBH5 modulates hematopoietic stem and progenitor cell energy metabolism through m<sup>6</sup>A modification-mediated RNA stability control.Cell Rep2023
37460872The Akt/mTOR and MNK/eIF4E pathways rewire the prostate cancer translatome to secrete HGF, SPP1 and BGN and recruit suppressive myeloid cells.Nat Cancer2023
37060569TERRA stability is regulated by RALY and polyadenylation in a telomere-specific manner.Cell Rep2023
37289021Alpha-1 Adrenergic Antagonists Sensitize Neuroblastoma to Therapeutic Differentiation.Cancer Res2023
35303483Precision analysis of mutant U2AF1 activity reveals deployment of stress granules in myeloid malignancies.Mol Cell2022
36516754Recruited monocytes/macrophages drive pulmonary neutrophilic inflammation and irreversible lung tissue remodeling in cystic fibrosis.Cell Rep2022
36567321Hydrogen peroxide induced by nerve injury promotes axon regeneration via connective tissue growth factor.Acta Neuropathol Commun2022
36595959Deconvolution of in vivo protein-RNA contacts using fractionated eCLIP-seq.STAR Protoc2022
36109149Widespread association of the Argonaute protein AGO2 with meiotic chromatin suggests a distinct nuclear function in mammalian male reproduction.Genome Res2022
35970913A slow-cycling/quiescent cells subpopulation is involved in glioma invasiveness.Nat Commun2022
35273342In vivo anti-tumor effect of PARP inhibition in IDH1/2 mutant MDS/AML resistant to targeted inhibitors of mutant IDH1/2.Leukemia2022
33778776Transcriptome-wide quantification of double-stranded RNAs in live mouse tissues by dsRIP-Seq.STAR Protoc2021
33826883Influence of the microenvironment on modulation of the host response by typhoid toxin.Cell Rep2021
33765277Active Ribosome Profiling with RiboLace: From Bench to Data Analysis.Methods Mol Biol2021
33674488Combined liver-cytokine humanization comes to the rescue of circulating human red blood cells.Science2021
32497523m[6]A Modification Prevents Formation of Endogenous Double-Stranded RNAs and Deleterious Innate Immune Responses during Hematopoietic Development.Immunity2020
33188776High-Spatial-Resolution Multi-Omics Sequencing via Deterministic Barcoding in Tissue.Cell2020
33159065Publisher Correction: Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS.Nat Commun2020
33046098The altered transcriptome of pediatric myelodysplastic syndrome revealed by RNA sequencing.J Hematol Oncol2020
32958857SMN-primed ribosomes modulate the translation of transcripts related to spinal muscular atrophy.Nat Cell Biol2020
32958772Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS.Nat Commun2020
30664659A highly efficient and faithful MDS patient-derived xenotransplantation model for pre-clinical studies.Nat Commun2019
31439541Low iron promotes megakaryocytic commitment of megakaryocytic-erythroid progenitors in humans and mice.Blood2019
30897080Hypomorphic mutation of the mouse Huntington's disease gene orthologue.PLoS Genet2019
29541451Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA.Cancer Metab2018
30029004HuD Is a Neural Translation Enhancer Acting on mTORC1-Responsive Genes and Counteracted by the Y3 Small Non-coding RNA.Mol Cell2018
30102689riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data.PLoS Comput Biol2018
29858584SRSF2 mutations drive oncogenesis by activating a global program of aberrant alternative splicing in hematopoietic cells.Leukemia2018
30355487Active Ribosome Profiling with RiboLace.Cell Rep2018
29643068Hydrogen peroxide is a neuronal alarmin that triggers specific RNAs, local translation of Annexin A2, and cytoskeletal remodeling in Schwann cells.RNA2018
28972179The hnRNP RALY regulates transcription and cell proliferation by modulating the expression of specific factors including the proliferation marker E2F1.J Biol Chem2017
28379492Identification and dynamic changes of RNAs isolated from RALY-containing ribonucleoprotein complexes.Nucleic Acids Res2017
29469820The Unexpected Tuners: Are LncRNAs Regulating Host Translation during Infections?Toxins (Basel)2017
29069603In Vivo Translatome Profiling in Spinal Muscular Atrophy Reveals a Role for SMN Protein in Ribosome Biology.Cell Rep2017
27055274The Typhoid Toxin Promotes Host Survival and the Establishment of a Persistent Asymptomatic Infection.PLoS Pathog2016
27503225RNAcommender: genome-wide recommendation of RNA-protein interactions.Bioinformatics2016
25564462Translational downregulation of HSP90 expression by iron chelators in neuroblastoma cells.Mol Pharmacol2015
26383020eIF6 coordinates insulin sensitivity and lipid metabolism by coupling translation to transcription.Nat Commun2015
26371376Global translation variations in host cells upon attack of lytic and sublytic Staphylococcus aureus α-haemolysin.Biochem J2015
26496938TrkA is amplified in malignant melanoma patients and induces an anti-proliferative response in cell lines.BMC Cancer2015
26081755Whole-genome cartography of p53 response elements ranked on transactivation potential.BMC Genomics2015
26240374RiboAbacus: a model trained on polyribosome images predicts ribosome density and translational efficiency from mammalian transcriptomes.Nucleic Acids Res2015
25713412Three distinct ribosome assemblies modulated by translation are the building blocks of polysomes.J Cell Biol2015
24222209tRanslatome: an R/Bioconductor package to portray translational control.Bioinformatics2014
26779400AURA 2: Empowering discovery of post-transcriptional networks.Translation (Austin)2014
25401416Cooperative interactions between p53 and NFκB enhance cell plasticity.Oncotarget2014
24758252PTRcombiner: mining combinatorial regulation of gene expression from post-transcriptional interaction maps.BMC Genomics2014
24926617p53-directed translational control can shape and expand the universe of p53 target genes.Cell Death Differ2014
24615732Increased frequency of minimal homozygous deletions is associated with poor prognosis in primary malignant melanoma patients.Genes Chromosomes Cancer2014
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Collaborators

Stephanie Halene
Smilow Cancer Center, Yale University School of Medicine
Co-authored papers 13
Giulia Biancon
Yale School of Medicine
Co-authored papers 8
Angela Re
Fondazione Istituto Italiano di Tecnologia
Co-authored papers 5
Mats Ljungman
Co-authored papers 2
Cristina Ivan
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Amber Jannasch
Purdue University
Co-authored papers 2
Rong Fan
Institute of Pathogens and Vectors, Dali University
Co-authored papers 2
Michelle T Paulsen
Co-authored papers 2
Jiannis Ragoussis
McGill University
Co-authored papers 2
Myriam Gorospe
National Institute on Aging (NIA), National Institutes of Health (NIH)
Co-authored papers 2
Diana L Cousminer
Children's Hospital of Philadelphia
Co-authored papers 2
Fang Fang
Co-authored papers 2
Mircea Ivan
Indiana University School of Medicine
Co-authored papers 2
William P Bone
University of Pennsylvania - Perelman School of Medicine
Co-authored papers 2
Francesco Muntoni
UCL Great Ormond Street Institute of Child Health
Co-authored papers 1
Simon Kasif
Boston University
Co-authored papers 1
Isaac S Kohane
Harvard Medical School
Co-authored papers 1
Adam Sharp
The Institute for Cancer Research
Co-authored papers 1
Wei Yuan
The Institute for Cancer Research
Co-authored papers 1
James F Gusella
Co-authored papers 1
Peter J Park
Harvard Medical School
Co-authored papers 1
Ranjit S Bindra
Yale University School of Medicine
Co-authored papers 1
Johann S de Bono
The Institute for Cancer Research
Co-authored papers 1
Valerie Gailus-Durner
Institute of Experimental Genetics, German Mouse Clinic
Co-authored papers 1
Weil R Lai
Tulane University School of Medicine
Co-authored papers 1
Tak W Mak
Princess Margaret Cancer Centre, University Health Network
Co-authored papers 1
Jan Rozman
German Center for Diabetes Research (DZD)
Co-authored papers 1
Martin Hrab?? de Angelis
German Center for Diabetes Research (DZD e.V.)
Co-authored papers 1
Helmut Fuchs
Institute of Experimental Genetics, German Mouse Clinic
Co-authored papers 1
Edward Courchaine
Yale University School of Medicine
Co-authored papers 1
Release 1.2