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Author Details

Alexander Crits-Christoph
University of California berkeley
2013
36
24
PMIDPaper TitleJournal TitlePublished Year
34453137Priority effects in microbiome assembly.Nat Rev Microbiol2022
37938723A widely distributed genus of soil Acidobacteria genomically enriched in biosynthetic gene clusters.ISME Commun2022
35764720Gut bacteria go on record.Nat Rev Gastroenterol Hepatol2022
35528135Interactions of Non-Nutritive Artificial Sweeteners with the Microbiome in Metabolic Syndrome.Immunometabolism2022
36261517Borgs are giant genetic elements with potential to expand metabolic capacity.Nature2022
35881010The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic.Science2022
35881005The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2.Science2022
35332832Good microbes, bad genes? The dissemination of antimicrobial resistance in the human microbiome.Gut Microbes2022
34873292Species- and site-specific genome editing in complex bacterial communities.Nat Microbiol2022
34987183Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs).ISME J2022
34608694Microcoleus (Cyanobacteria) form watershed-wide populations without strong gradients in population structure.Mol Ecol2022
34599307Author Correction: Priority effects in microbiome assembly.Nat Rev Microbiol2022
33468686Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants.mBio2021
33759506Sewage, Salt, Silica, and SARS-CoV-2 (4S): An Economical Kit-Free Method for Direct Capture of SARS-CoV-2 RNA from Wastewater.Environ Sci Technol2021
34480864The origins of SARS-CoV-2: A critical review.Cell2021
34622230Infant gut strain persistence is associated with maternal origin, phylogeny, and traits including surface adhesion and iron acquisition.Cell Rep Med2021
34373850Tools for interpretation of wastewater SARS-CoV-2 temporal and spatial trends demonstrated with data collected in the San Francisco Bay Area.Water Res X2021
34022966Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale.Microbiome2021
33462508inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains.Nat Biotechnol2021
33361114Transporter genes in biosynthetic gene clusters predict metabolite characteristics and siderophore activity.Genome Res2021
32327732Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow.ISME J2020
31937678Consistent Metagenome-Derived Metrics Verify and Delineate Bacterial Species Boundaries.mSystems2020
33300015Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater.medRxiv2020
32839536Large freshwater phages with the potential to augment aerobic methane oxidation.Nat Microbiol2020
32546614Bacterial Secondary Metabolite Biosynthetic Potential in Soil Varies with Phylum, Depth, and Vegetation Type.mBio2020
30723205TGFβ/BMP immune signaling affects abundance and function of C. elegans gut commensals.Nat Commun2019
31844663Necrotizing enterocolitis is preceded by increased gut bacterial replication, <i>Klebsiella</i>, and fimbriae-encoding bacteria.Sci Adv2019
31866955Genome-Resolved Proteomic Stable Isotope Probing of Soil Microbial Communities Using <sup>13</sup>CO<sub>2</sub> and <sup>13</sup>C-Methanol.Front Microbiol2019
31110364Mediterranean grassland soil C-N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms.Nat Microbiol2019
29899444Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis.Nature2018
27000067A benchmark for microRNA quantification algorithms using the OpenArray platform.BMC Bioinformatics2016
27832061Ten Simple Rules for Developing Public Biological Databases.PLoS Comput Biol2016
26914534Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community.Environ Microbiol2016
27014224Phylogenetic and Functional Substrate Specificity for Endolithic Microbial Communities in Hyper-Arid Environments.Front Microbiol2016
24372972Microbial diversity and the presence of algae in halite endolithic communities are correlated to atmospheric moisture in the hyper-arid zone of the Atacama Desert.Environ Microbiol2015
24451153Colonization patterns of soil microbial communities in the Atacama Desert.Microbiome2013
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Collaborators

University of California berkeley
Co-authored papers 8
Sydney Institute for Infectious Diseases, The University of Sydney
Co-authored papers 3
Institute of Ecology and Evolution, University of Edinburgh
Co-authored papers 3
University of California
Co-authored papers 3
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Co-authored papers 3
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Co-authored papers 3
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Co-authored papers 2
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Co-authored papers 2
University of California los angeles
Co-authored papers 2
Co-authored papers 1
David Geffen School of Medicine, University of California los angeles
Co-authored papers 1
Rega Institute, Laboratory of Clinical and Evolutionary Virology
Co-authored papers 1
University of California
Co-authored papers 1
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Bonita Vista High School, University of California San Diego, University of California, San Diego
Co-authored papers 1
Co-authored papers 1
University of California
Co-authored papers 1
The Scripps Research Institute
Co-authored papers 1
Co-authored papers 1
Korea University College of Medicine
Co-authored papers 1
Malaysia Genome and Vaccine Institute, National Institute of Biotechnology Malaysia
Co-authored papers 1
Lawrence Berkeley National Laboratory
Co-authored papers 1
Malaysia Genome and Vaccine Institute
Co-authored papers 1
University of California
Co-authored papers 1
University of Arizona
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the Scripps Research Institute
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