Author details

Full Name

Alexander D Diehl

Affiliation

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

ORCID

Career Start Year

1986

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
37609265	MRIO: The Magnetic Resonance Imaging Acquisition and Analysis Ontology.	bioRxiv	2023
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
37609265	MRIO: The Magnetic Resonance Imaging Acquisition and Analysis Ontology.	bioRxiv	2023
36282863	GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology.	Bioinformatics	2022
36282863	GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology.	Bioinformatics	2022
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
32939051	Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project.	Nat Rev Nephrol	2020
32939051	Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project.	Nat Rev Nephrol	2020
34707469	Foundations for a Realism-Based Ontology of Protein Aggregates.	CEUR Workshop Proc	2020
34707469	Foundations for a Realism-Based Ontology of Protein Aggregates.	CEUR Workshop Proc	2020
31272372	An ontology for representing hematologic malignancies: the cancer cell ontology.	BMC Bioinformatics	2019
31272390	Reporting and connecting cell type names and gating definitions through ontologies.	BMC Bioinformatics	2019
31272389	OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.	BMC Bioinformatics	2019
31272374	Cells in ExperimentaL Life Sciences (CELLS-2018): capturing the knowledge of normal and diseased cells with ontologies.	BMC Bioinformatics	2019
31272372	An ontology for representing hematologic malignancies: the cancer cell ontology.	BMC Bioinformatics	2019
31272390	Reporting and connecting cell type names and gating definitions through ontologies.	BMC Bioinformatics	2019
31272389	OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.	BMC Bioinformatics	2019
31272374	Cells in ExperimentaL Life Sciences (CELLS-2018): capturing the knowledge of normal and diseased cells with ontologies.	BMC Bioinformatics	2019
29590361	Cell type discovery using single-cell transcriptomics: implications for ontological representation.	Hum Mol Genet	2018
29590361	Cell type discovery using single-cell transcriptomics: implications for ontological representation.	Hum Mol Genet	2018
27899649	Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.	Nucleic Acids Res	2017
28423829	Ontological Realism for the Research Domain Criteria for Mental Disorders.	Stud Health Technol Inform	2017
29322916	Cells in experimental life sciences - challenges and solution to the rapid evolution of knowledge.	BMC Bioinformatics	2017
27899649	Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.	Nucleic Acids Res	2017
28423829	Ontological Realism for the Research Domain Criteria for Mental Disorders.	Stud Health Technol Inform	2017
29322916	Cells in experimental life sciences - challenges and solution to the rapid evolution of knowledge.	BMC Bioinformatics	2017
27034769	Representing vision and blindness.	J Biomed Semantics	2016
27377652	The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability.	J Biomed Semantics	2016
27034769	Representing vision and blindness.	J Biomed Semantics	2016
27377652	The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability.	J Biomed Semantics	2016
25481008	flowCL: ontology-based cell population labelling in flow cytometry.	Bioinformatics	2015
25481008	flowCL: ontology-based cell population labelling in flow cytometry.	Bioinformatics	2015
25678556	Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.	Science	2015
25723102	Gateways to the FANTOM5 promoter level mammalian expression atlas.	Genome Biol	2015
25678556	Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.	Science	2015
25723102	Gateways to the FANTOM5 promoter level mammalian expression atlas.	Genome Biol	2015
24270789	Protein Ontology: a controlled structured network of protein entities.	Nucleic Acids Res	2014
25852852	CLO: The cell line ontology.	J Biomed Semantics	2014
24270789	Protein Ontology: a controlled structured network of protein entities.	Nucleic Acids Res	2014
24670764	A promoter-level mammalian expression atlas.	Nature	2014
25852852	CLO: The cell line ontology.	J Biomed Semantics	2014
24670764	A promoter-level mammalian expression atlas.	Nature	2014
24004649	Ontology based molecular signatures for immune cell types via gene expression analysis.	BMC Bioinformatics	2013
24314207	The neurological disease ontology.	J Biomed Semantics	2013
24004649	Ontology based molecular signatures for immune cell types via gene expression analysis.	BMC Bioinformatics	2013
24314207	The neurological disease ontology.	J Biomed Semantics	2013
23251424	A unified anatomy ontology of the vertebrate skeletal system.	PLoS One	2012
23251424	A unified anatomy ontology of the vertebrate skeletal system.	PLoS One	2012

1 - 50 of 82

Simon Jupp

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 23

Janna Hastings

Institute for Implementation Science in Health Care, University of Zurich

Career Start Year 2008

Number of shared co-authors 13

Y Megan Kong

Centro Hospitalar Conde de Sao Januario

Career Start Year 2006

Number of shared co-authors 5

Robert Hoehndorf

King Abdullah University of Science and Technology

Career Start Year 2006

Number of shared co-authors 30

Daniel Schober

Institute of Forensic Medicine, University of Bern

Career Start Year 2005

Number of shared co-authors 23

Larisa N Soldatova

University of London

Career Start Year 2005

Number of shared co-authors 17

Erick Antezana

Norwegian University of Science and Technology

Career Start Year 2004

Number of shared co-authors 14

Wenjin Jim Zheng

University of Texas Health Science Center at Houston

Career Start Year 2004

Number of shared co-authors 7

Rebecca E Foulger

Queen Mary University of London

Career Start Year 2003

Number of shared co-authors 76

Varsha K Khodiyar

Institute of Cardiovascular Science, University College London

Career Start Year 2002

Number of shared co-authors 60

Norman Morrison

European Bioinformatics Institute

Career Start Year 2001

Number of shared co-authors 27

Andrew I Su

The Scripps Research Institute

Career Start Year 2001

Number of shared co-authors 20

Paola Roncaglia

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2000

Number of shared co-authors 76

Michael Bada

Center for Health AI, University of Colorado Anschutz Medical Campus

Career Start Year 2000

Number of shared co-authors 14

Georgios V Gkoutos

Institute of Cancer and Genomic Sciences, University of Birmingham

Career Start Year 2000

Number of shared co-authors 41

Marco Roos

Leiden University Medical Center

Career Start Year 1999

Number of shared co-authors 15

Robert Stevens

The University of Manchester

Career Start Year 1998

Number of shared co-authors 8

Michel Dumontier

Institute of Data Science, Maastricht University

Career Start Year 1998

Number of shared co-authors 56

Fabien Campagne

Weill Cornell Medical College

Career Start Year 1998

Number of shared co-authors 3

J Lynn Fink

The University of Queensland Diamantina Institute, The University of Queensland

Career Start Year 1997

Number of shared co-authors 60

Katherine Wolstencroft

Leiden Institute of Advanced Computer Science, Leiden University

Career Start Year 1997

Number of shared co-authors 17

Georg Fuellen

Rostock University Medical Center

Career Start Year 1996

Number of shared co-authors 5

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 79

Lawrence E Hunter

University of Colorado School of Medicine

Career Start Year 1993

Number of shared co-authors 8

Patricia L Whetzel

University of Colorado Anschutz Medical Campus

Career Start Year 1993

Number of shared co-authors 42

Mark D Wilkinson

Universidad Politecnica de Madrid (UPM)

Career Start Year 1993

Number of shared co-authors 16

Phillip Lord

Newcastle University

Career Start Year 1991

Number of shared co-authors 22

Warren A Kibbe

Duke Clinical Research Institute, Duke University

Career Start Year 1987

Number of shared co-authors 76

Paul N Schofield

University of Cambridge

Career Start Year 1982

Number of shared co-authors 36

Yves A Lussier

Center for Biomedical Informatics and Biostatistics, University of Arizona

Career Start Year 1971

Number of shared co-authors 3

row(s) 1 - 30 of 30

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 14

Judith A Blake

Co-authored papers 11

Terrence F Meehan

European Bioinformatics Institute

Co-authored papers 8

Alan Ruttenberg

University at Buffalo

Co-authored papers 7

William D Duncan

University of Florida

Co-authored papers 7

Richard H Scheuermann

J. Craig Venter Institute

Co-authored papers 6

Yongqun He

University of Michigan Medical School ann arbor

Co-authored papers 6

Melissa A Haendel

Co-authored papers 6

Barry Smith

University at Buffalo

Co-authored papers 6

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 6

Bjoern Peters

University of Washington School of Medicine

Co-authored papers 5

Sirarat Sarntivijai

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 5

Karen R Christie

Stanford University Medical School

Co-authored papers 4

Harold J Drabkin

Massachusetts Institute of Technology