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Author Details

Michael J Considine
Johns Hopkins University School of Medicine
2001
87
33
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36534524Evaluation of a Liquid Biopsy-Breast Cancer Methylation (LBx-BCM) Cartridge Assay for Predicting Early Disease Progression and Survival: TBCRC 005 Prospective Trial.Clin Cancer Res2023
37507870Hydrogen Cyanamide Causes Reversible G2/M Cell Cycle Arrest Accompanied by Oxidation of the Nucleus and Cytosol.Antioxidants (Basel)2023
37288524Three-dimensional food printing: its readiness for a food and nutrition insecure world.Proc Nutr Soc2023
36994639Metabolic regulation of quiescence in plants.Plant J2023
36479711Integration of reactive oxygen species and nutrient signalling to shape root system architecture.Plant Cell Environ2023
36637421Systematic evaluation of chromatin immunoprecipitation sequencing to study histone occupancy in dormancy transitions of grapevine buds.Tree Physiol2023
35022731The bud dormancy disconnect: latent buds of grapevine are dormant during summer despite a high metabolic rate.J Exp Bot2022
36629827Evaluation of vacuum infiltration vitrification and cryo-mesh cryopreservation techniques with Arabidopsis thaliana shoot tips.Cryo Letters2022
36052016Interrogation of T Cell-Enriched Tumors Reveals Prognostic and Immunotherapeutic Implications of Polyamine Metabolism.Cancer Res Commun2022
35283905An Evaluation of Nuclei Preparation of the Dormant Axillary Bud of Grapevine for Cell Cycle Analysis by Flow Cytometry.Front Plant Sci2022
35201318Entinostat Decreases Immune Suppression to Promote Antitumor Responses in a HER2+ Breast Tumor Microenvironment.Cancer Immunol Res2022
32880966Root system architecture, physiological and transcriptional traits of soybean (Glycine max L.) in response to water deficit: A review.Physiol Plant2021
33793863Oxygen and reactive oxygen species-dependent regulation of plant growth and development.Plant Physiol2021
34106236Stress effects on the reactive oxygen species-dependent regulation of plant growth and development.J Exp Bot2021
34001907Running the full human developmental clock in interspecies chimeras using alternative human stem cells with expanded embryonic potential.NPJ Regen Med2021
33408119Newly Identified Members of FGFR1 Splice Variants Engage in Cross-talk with AXL/AKT Axis in Salivary Adenoid Cystic Carcinoma.Cancer Res2021
31037309The initiation of bud burst in grapevine features dynamic regulation of the apoplastic pore size.J Exp Bot2020
32744555Phenolic composition of 91 Australian apple varieties: towards understanding their health attributes.Food Funct2020
32817081Methylomic Landscapes of Ovarian Cancer Precursor Lesions.Clin Cancer Res2020
32694696Correction: Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab in HNSCC-sensitive cell lines.Br J Cancer2020
32362655Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab in HNSCC-sensitive cell lines.Br J Cancer2020
32213106Cytokines secreted by stromal cells in TNBC microenvironment as potential targets for cancer therapy.Cancer Biol Ther2020
32273276Evaluation of Cyclophosphamide/GVAX Pancreas Followed by Listeria-Mesothelin (CRS-207) with or without Nivolumab in Patients with Pancreatic Cancer.Clin Cancer Res2020
32349388Integrative Transcriptome Analyses of the Human Fallopian Tube: Fimbria and Ampulla-Site of Origin of Serous Carcinoma of the Ovary.Cancers (Basel)2020
32164487Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma.Epigenetics2020
30329164Modelling predicts that soybean is poised to dominate crop production across Africa.Plant Cell Environ2019
31636280Differentially Methylated Super-Enhancers Regulate Target Gene Expression in Human Cancer.Sci Rep2019
31611308Functional Loss of <i>ATRX</i> and <i>TERC</i> Activates Alternative Lengthening of Telomeres (ALT) in LAPC4 Prostate Cancer Cells.Mol Cancer Res2019
30863929DNA methylation genome-wide analysis in remnant and primary gastric cancers.Gastric Cancer2019
31002670CancerInSilico: An R/Bioconductor package for combining mathematical and statistical modeling to simulate time course bulk and single cell gene expression data in cancer.PLoS Comput Biol2019
29342249Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.Bioinformatics2018
29809202Corrigendum: Nitric Oxide Enables Germination by a Four-Pronged Attack on ABA-Induced Seed Dormancy.Front Plant Sci2018
30118659Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma.Transl Res2018
30037853Molecular Portrait of Hypoxia in Breast Cancer: A Prognostic Signature and Novel HIF-Regulated Genes.Mol Cancer Res2018
29792227Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance.Genome Med2018
29593760Nitric Oxide Enables Germination by a Four-Pronged Attack on ABA-Induced Seed Dormancy.Front Plant Sci2018
29336037Developmental control of hypoxia during bud burst in grapevine.Plant Cell Environ2018
29086478Flavonoid-Rich Apple Improves Endothelial Function in Individuals at Risk for Cardiovascular Disease: A Randomized Controlled Clinical Trial.Mol Nutr Food Res2018
29203560Roles for Light, Energy, and Oxygen in the Fate of Quiescent Axillary Buds.Plant Physiol2018
29029829Oxygen, Energy, and Light Signalling Direct Meristem Fate.Trends Plant Sci2018
27986423Learning To Breathe: Developmental Phase Transitions in Oxygen Status.Trends Plant Sci2017
28457165Redox Changes During the Cell Cycle in the Embryonic Root Meristem of Arabidopsis thaliana.Antioxid Redox Signal2017
28499041Nature's pulse power: legumes, food security and climate change.J Exp Bot2017
28174896PatternMarkers &amp; GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.Bioinformatics2017
28981580Cell cycle arrest in plants: what distinguishes quiescence, dormancy and differentiated G1?Ann Bot2017
29042553Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma.Nat Commun2017
28947419Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks.Cancer Res2017
28871539Mitochondrial Respiration and Oxygen Tension.Methods Mol Biol2017
28733453A Novel Functional Splice Variant of <i>AKT3</i> Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers.Cancer Res2017
27053719On the language and physiology of dormancy and quiescence in plants.J Exp Bot2016
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Collaborators

Elana J Fertig
Johns Hopkins University School of Medicine
Co-authored papers 26
Daria A Gaykalova
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 14
Alexander V Favorov
Johns Hopkins School of Medicine
Co-authored papers 10
Joseph A Califano
University of California
Co-authored papers 9
Theresa Guo
Moores Cancer Center, University of California
Co-authored papers 8
Ludmila Danilova
Bloomberg-Kimmel Immunotherapy Institute, Johns Hopkins University School of Medicine
Co-authored papers 8
Leslie Cope
Johns Hopkins University School of Medicine
Co-authored papers 7
Michael F Ochs
The College of New Jersey
Co-authored papers 6
Sarah J Wheelan
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 5
Wayne M Koch
Johns Hopkins University School of Medicine
Co-authored papers 5
Justin A Bishop
UT Southwestern Medical Center
Co-authored papers 5
Patrick K Ha
University of California San Francisco
Co-authored papers 5
Zubair Khan
University of Texas at Houston Health Science Center
Co-authored papers 4
Srinivasan Yegnasubramanian
Johns Hopkins University School of Medicine
Co-authored papers 4
Genevieve L Stein-O'Brien
Johns Hopkins School of Medicine
Co-authored papers 4
William H Westra
Icahn School of Medicine at Mount Sinai Hospital.
Co-authored papers 4
A. H. Millar
Co-authored papers 3
Haixia Cheng
Children's Hospital of Nanjing Medical University
Co-authored papers 3
Mark L Wahlqvist
Co-authored papers 2
Jason D Howard
a Vaccinogen Inc.
Co-authored papers 2
Hyunseok Kang
Johns Hopkins University
Co-authored papers 2
Elizabeth M Jaffee
Convergence Institute, Johns Hopkins University
Co-authored papers 2
Luigi Marchionni
Weill-Cornell School of Medicine
Co-authored papers 2
Elias T Zambidis
Institute for Cell Engineering, The Johns Hopkins University School of Medicine
Co-authored papers 2
Patricia A Shaw
Princess Margaret Cancer Centre, University Avenue
Co-authored papers 2
Antonio C Wolff
Co-authored papers 1
Ryan Lister
Co-authored papers 1
Donald Geman
Johns Hopkins University
Co-authored papers 1
Xiaoxin Xia
Johns Hopkins University
Co-authored papers 1
Joanne B Weidhaas
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Release 1.2