Author details

Full Name

Robert Hubley

Affiliation

ORCID

Career Start Year

2002

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37536694	Survey of COVID-19 Vaccine Attitudes in Predominately Minority Pregnant Women.		2023
37612512	The complete sequence of a human Y chromosome.	Nature	2023
37071810	Chiropterans Are a Hotspot for Horizontal Transfer of DNA Transposons in Mammalia.	Mol Biol Evol	2023
37104599	Evolutionary constraint and innovation across hundreds of placental mammals.	Science	2023
35962045	Author Correction: Comparative and demographic analysis of orang-utan genomes.	Nature	2022
35591887	Accuracy of multiple sequence alignment methods in the reconstruction of transposable element families.	NAR Genomics and Bioinformatics	2022
35456515	Methodologies for the Discovery of Transposable Element Families.	Genes	2022
34749730	The transposable element-rich genome of the cereal pest Sitophilus oryzae.	BMC Biol	2021
34154643	TE Hub: A community-oriented space for sharing and connecting tools, data, resources, and methods for transposable element annotation.	Mobile DNA	2021
34138525	Curation Guidelines for de novo Generated Transposable Element Families.	Current Protocols	2021
33436076	The Dfam community resource of transposable element families, sequence models, and genome annotations.	Mobile DNA	2021
32300014	RepeatModeler2 for automated genomic discovery of transposable element families.	Proc Natl Acad Sci U S A	2020
26612867	The Dfam database of repetitive DNA families.	Nucleic Acids Res	2016
26916108	Discovery of a new repeat family in the Callithrix jacchus genome.	Genome Res	2016
26244060	A call for benchmarking transposable element annotation methods.	Mob DNA	2015
25428374	The UCSC Genome Browser database: 2015 update.	Nucleic Acids Res	2015
25209798	Gibbon genome and the fast karyotype evolution of small apes.	Nature	2014
25504731	Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.	Science	2014
24497848	Relationship estimation from whole-genome sequence data.	PLoS Genet	2014
24837662	A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence data.	Nat Biotechnol	2014
23203985	Dfam: a database of repetitive DNA based on profile hidden Markov models.	Nucleic Acids Res	2013
22541534	Orangutan Alu quiescence reveals possible source element: support for ancient backseat drivers.	Mob DNA	2012
21855840	Chromosomal haplotypes by genetic phasing of human families.	Am J Hum Genet	2011
21270892	Comparative and demographic analysis of orang-utan genomes.	Nature	2011
20360741	The genome of a songbird.	Nature	2010
20624734	PiggyBac-ing on a primate genome: novel elements, recent activity and horizontal transfer.	Genome Biology and Evolution	2010
20220176	Analysis of genetic inheritance in a family quartet by whole-genome sequencing.	Science	2010
18502942	DupMasker: a tool for annotating primate segmental duplications.	Genome Res	2008
17431169	Mobile DNA in Old World monkeys: a glimpse through the rhesus macaque genome.	Science	2007
15529173	A common open representation of mass spectrometry data and its application to proteomics research.	Nat Biotechnol	2004
12875658	Evolutionary algorithms for the selection of single nucleotide polymorphisms.	BMC Bioinformatics	2003
11881830	Spectral analysis of distributions: finding periodic components in eukaryotic enzyme length data.	OMICS	2002
12225585	Design and implementation of microarray gene expression markup language (MAGE-ML).	Genome Biol	2002