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Author Details

Johan T den Dunnen
Leiden University Medical Center
1982
338
80
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36696755Hematologically important mutations: Leukocyte adhesion deficiency (second update).Blood Cells Mol Dis2023
33981013Stepwise ABC system for classification of any type of genetic variant.Eur J Hum Genet2022
34750192New locus underlying auriculocondylar syndrome (ARCND): 430 kb duplication involving <i>TWIST1</i> regulatory elements.J Med Genet2022
34837429NR2F1 database: 112 variants and 84 patients support refining the clinical synopsis of Bosch-Boonstra-Schaaf optic atrophy syndrome.Hum Mutat2022
33252176Verifying nomenclature of DNA variants in submitted manuscripts: Guidance for journals.Hum Mutat2021
33542429Newborn screening of duchenne muscular dystrophy specifically targeting deletions amenable to exon-skipping therapy.Sci Rep2021
33538839Mutalyzer 2: next generation HGVS nomenclature checker.Bioinformatics2021
35008485Integrating Whole-Genome Sequencing in Clinical Genetics: A Novel Disruptive Structural Rearrangement Identified in the Dystrophin Gene (<i>DMD</i>).Int J Mol Sci2021
34440449A Case Series of Familial <i>ARID1B</i> Variants Illustrating Variable Expression and Suggestions to Update the ACMG Criteria.Genes (Basel)2021
34521998The LOVD3 platform: efficient genome-wide sharing of genetic variants.Eur J Hum Genet2021
34539735The Role of the European Society of Human Genetics in Delivering Genomic Education.Front Genet2021
34354088ACO2 clinicobiological dataset with extensive phenotype ontology annotation.Sci Data2021
33266138Using Personal Genomic Data within Primary Care: A Bioinformatics Approach to Pharmacogenomics.Genes (Basel)2020
31397982Efficient variant data preparation for Human Mutation manuscripts: Variants and phenotypes.Hum Mutat2019
31500643OPA1: 516 unique variants and 831 patients registered in an updated centralized Variome database.Orphanet J Rare Dis2019
31356707Phenotype predictions for exon deletions/duplications: A user guide for professionals and clinicians using Becker and Duchenne muscular dystrophy as examples.Hum Mutat2019
31296341Templated Insertions: A Smoking Gun for Polymerase Theta-Mediated End Joining.Trends Genet2019
31433103Dutch genome diagnostic laboratories accelerated and improved variant interpretation and increased accuracy by sharing data.Hum Mutat2019
27911167Recommendations for a nomenclature system for reporting methylation aberrations in imprinted domains.Epigenetics2018
30055037LAMA2 gene mutation update: Toward a more comprehensive picture of the laminin-α2 variome and its related phenotypes.Hum Mutat2018
29852469Short hypervariable microhaplotypes: A novel set of very short high discriminating power loci without stutter artefacts.Forensic Sci Int Genet2018
30586411BRCA Challenge: BRCA Exchange as a global resource for variants in BRCA1 and BRCA2.PLoS Genet2018
29645308Yet another database?Hum Mutat2018
29777667Properties and units in the clinical laboratory sciences part XXIV. Properties and units in clinical molecular genetics (technical report 2017).Clin Chim Acta2018
29466448A dystrophic Duchenne mouse model for testing human antisense oligonucleotides.PLoS One2018
29598823Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing.Genome Biol2018
29250858Structural and sequence variants in patients with Silver-Russell syndrome or similar features-Curation of a disease database.Hum Mutat2018
28044389In Silico Functional Meta-Analysis of 5,962 ABCA4 Variants in 3,928 Retinal Dystrophy Cases.Hum Mutat2017
28475856International Cooperation to Enable the Diagnosis of All Rare Genetic Diseases.Am J Hum Genet2017
28378423Detecting PKD1 variants in polycystic kidney disease patients by single-molecule long-read sequencing.Hum Mutat2017
28471515Critical points for an accurate human genome analysis.Hum Mutat2017
28570578Effect of post-mortem delay on N-terminal huntingtin protein fragments in human control and Huntington disease brain lysates.PLoS One2017
27822869Describing Sequence Variants Using HGVS Nomenclature.Methods Mol Biol2017
27821657The UCL low-density lipoprotein receptor gene variant database: pathogenicity update.J Med Genet2017
28044414Flexible and Scalable Full-Length CYP2D6 Long Amplicon PacBio Sequencing.Hum Mutat2017
26919047The Implicitome: A Resource for Rationalizing Gene-Disease Associations.PLoS One2016
28172869Decay of Sexual Trait Genes in an Asexual Parasitoid Wasp.Genome Biol Evol2016
26479518Pharmacogenetic allele nomenclature: International workgroup recommendations for test result reporting.Clin Pharmacol Ther2016
27590662A full-body transcriptome and proteome resource for the European common carp.BMC Genomics2016
27499327Deciphering Variability of PKD1 and PKD2 in an Italian Cohort of 643 Patients with Autosomal Dominant Polycystic Kidney Disease (ADPKD).Sci Rep2016
27570071Hypomorphic MKS1 mutation in a Pakistani family with mild Joubert syndrome and atypical features: Expanding the phenotypic spectrum of MKS1-related ciliopathies.Am J Med Genet A2016
27367167Sequence Variant Descriptions: HGVS Nomenclature and Mutalyzer.Curr Protoc Hum Genet2016
26779178The Complete Genome Sequence of the Murine Pathobiont Helicobacter typhlonius.Front Microbiol2016
26931183HGVS Recommendations for the Description of Sequence Variants: 2016 Update.Hum Mutat2016
26919400HGVS Nomenclature in Practice: An Example from the United Kingdom National External Quality Assessment Scheme.Hum Mutat2016
24893805Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing.Mol Ecol Resour2015
26269248Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects.Eur J Hum Genet2015
26320104Akkermansia muciniphila and Helicobacter typhlonius modulate intestinal tumor development in mice.Carcinogenesis2015
26295439The Matchmaker Exchange: a platform for rare disease gene discovery.Hum Mutat2015
26450963SplicePie: a novel analytical approach for the detection of alternative, non-sequential and recursive splicing.Nucleic Acids Res2015
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Collaborators

Co-authored papers 126
Radboud University Medical Center
Co-authored papers 44
Co-authored papers 16
National Institute for Public Health and the Environment
Co-authored papers 15
Leiden University Medical Center (LUMC)Leiden
Co-authored papers 11
Lund University
Co-authored papers 10
Co-authored papers 8
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 8
Institute of Genetic Medicine, International Centre for Life
Co-authored papers 7
The Rockefeller University
Co-authored papers 7
University of Leicester
Co-authored papers 7
Cancer Center Amsterdam
Co-authored papers 7
Population Health Sciences Institute, Newcastle University
Co-authored papers 6
Leiden University Medical Center
Co-authored papers 5
The Broad Institute of MIT and Harvard
Co-authored papers 5
Johns Hopkins University School of Medicine
Co-authored papers 5
Maastricht University Medical Centre
Co-authored papers 4
Co-authored papers 4
Oregon Health & Science University (OHSU)
Co-authored papers 4
European Bioinformatics Institute
Co-authored papers 4
Erasmus University Medical Center
Co-authored papers 4
Leiden University Medical Center
Co-authored papers 4
Co-authored papers 4
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Wellcome Sanger Institute
Co-authored papers 3
University of California los angeles
Co-authored papers 3
Johns Hopkins University School of Medicine
Co-authored papers 3
Co-authored papers 3
Anthony Nolan Research Institute, Royal Free Hospital
Co-authored papers 3
Children's Hospital of Eastern Ontario Research Institute
Co-authored papers 3