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Author Details

Xijin Ge
South Dakota State University
2002
41
22
Antoine Forget (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37482573Code Interpreter for Bioinformatics: Are We There Yet?Ann Biomed Eng2024
37482573Code Interpreter for Bioinformatics: Are We There Yet?Ann Biomed Eng2024
34800604Influence of conceptus presence and preovulatory estradiol exposure on uterine gene transcripts and proteins around maternal recognition of pregnancy in beef cattle.Mol Cell Endocrinol2022
34800604Influence of conceptus presence and preovulatory estradiol exposure on uterine gene transcripts and proteins around maternal recognition of pregnancy in beef cattle.Mol Cell Endocrinol2022
33962467Influence of estradiol on bovine trophectoderm and uterine gene transcripts around maternal recognition of pregnancyâ¿ .Biol Reprod2021
33962467Influence of estradiol on bovine trophectoderm and uterine gene transcripts around maternal recognition of pregnancyâ¿ .Biol Reprod2021
33835455iDEP Web Application for RNA-Seq Data Analysis.Methods Mol Biol2021
33835455iDEP Web Application for RNA-Seq Data Analysis.Methods Mol Biol2021
31882993ShinyGO: a graphical gene-set enrichment tool for animals and plants.Bioinformatics2020
32020611Hydrotropism in the primary roots of maize.New Phytol2020
31882993ShinyGO: a graphical gene-set enrichment tool for animals and plants.Bioinformatics2020
32020611Hydrotropism in the primary roots of maize.New Phytol2020
30567491iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data.BMC Bioinformatics2018
30567491iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data.BMC Bioinformatics2018
27871141Root isoflavonoids and hairy root transformation influence key bacterial taxa in the soybean rhizosphere.Environ Microbiol2017
29017918Comparative analysis of methicillin-sensitive and resistant Staphylococcus aureus exposed to emodin based on proteomic profiling.Biochem Biophys Res Commun2017
28490517ATOH1 Promotes Leptomeningeal Dissemination and Metastasis of Sonic Hedgehog Subgroup Medulloblastomas.Cancer Res2017
28231763Exploratory bioinformatics investigation reveals importance of "junk" DNA in early embryo development.BMC Genomics2017
27871141Root isoflavonoids and hairy root transformation influence key bacterial taxa in the soybean rhizosphere.Environ Microbiol2017
28231763Exploratory bioinformatics investigation reveals importance of "junk" DNA in early embryo development.BMC Genomics2017
28490517ATOH1 Promotes Leptomeningeal Dissemination and Metastasis of Sonic Hedgehog Subgroup Medulloblastomas.Cancer Res2017
29017918Comparative analysis of methicillin-sensitive and resistant Staphylococcus aureus exposed to emodin based on proteomic profiling.Biochem Biophys Res Commun2017
25398003Meta-analysis of gene expression signatures reveals hidden links among diverse biological processes in Arabidopsis.PLoS One2014
25398003Meta-analysis of gene expression signatures reveals hidden links among diverse biological processes in Arabidopsis.PLoS One2014
23577827Conserved expression of natural antisense transcripts in mammals.BMC Genomics2013
24266891A cross disciplinary study of link decay and the effectiveness of mitigation techniques.BMC Bioinformatics2013
23422947Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines.Sci Rep2013
23577827Conserved expression of natural antisense transcripts in mammals.BMC Genomics2013
23457664Extending MapMan Ontology to Tobacco for Visualization of Gene Expression.Dataset Pap Biol2013
24266891A cross disciplinary study of link decay and the effectiveness of mitigation techniques.BMC Bioinformatics2013
23422947Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines.Sci Rep2013
23457664Extending MapMan Ontology to Tobacco for Visualization of Gene Expression.Dataset Pap Biol2013
22474412ArraySearch: A Web-Based Genomic Search Engine.Comp Funct Genomics2012
22694750Identification of metagenes and their interactions through large-scale analysis of Arabidopsis gene expression data.BMC Genomics2012
22474412ArraySearch: A Web-Based Genomic Search Engine.Comp Funct Genomics2012
22870193Regulation of gene expression with thyroid hormone in rats with myocardial infarction.PLoS One2012
22760305AraPath: a knowledgebase for pathway analysis in Arabidopsis.Bioinformatics2012
22760305AraPath: a knowledgebase for pathway analysis in Arabidopsis.Bioinformatics2012
22694750Identification of metagenes and their interactions through large-scale analysis of Arabidopsis gene expression data.BMC Genomics2012
22870193Regulation of gene expression with thyroid hormone in rats with myocardial infarction.PLoS One2012
21059815Gene expression profiles of estrogen receptor-positive and estrogen receptor-negative breast cancers are detectable in histologically normal breast epithelium.Clin Cancer Res2011
21059815Gene expression profiles of estrogen receptor-positive and estrogen receptor-negative breast cancers are detectable in histologically normal breast epithelium.Clin Cancer Res2011
21619705Large-scale analysis of expression signatures reveals hidden links among diverse cellular processes.BMC Syst Biol2011
21542783Early gene response of human brain microvascular endothelial cells to Listeria monocytogenes infection.Can J Microbiol2011
21619705Large-scale analysis of expression signatures reveals hidden links among diverse cellular processes.BMC Syst Biol2011
21542783Early gene response of human brain microvascular endothelial cells to Listeria monocytogenes infection.Can J Microbiol2011
20676074The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.Nat Biotechnol2010
20676074The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.Nat Biotechnol2010
19309505Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and - susceptible, winter wheat mutant lines.BMC Plant Biol2009
19309505Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and - susceptible, winter wheat mutant lines.BMC Plant Biol2009
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Collaborators

Jian Cui
Co-authored papers 1
Francisco Martinez Murillo
Co-authored papers 1
Brian Quanz
Co-authored papers 1
Fabien Campagne
Weill Cornell Medical College
Co-authored papers 1
Richard A Moffitt
Stony Brook University, and Stony Brook Cancer Center
Co-authored papers 1
Jill P Mesirov
University of California San Diego
Co-authored papers 1
Ulrich Sch??ller
University Medical Center Hamburg-Eppendorf
Co-authored papers 1
John D Shaughnessy
Co-authored papers 1
Rui Jiang
Co-authored papers 1
Aaron Smalter
Co-authored papers 1
Matthew Woods
Co-authored papers 1
Wendy S Rubinstein
CancerLinQ LLC, American Society of Clinical Oncology
Co-authored papers 1
Roderick V Jensen
Virginia Tech
Co-authored papers 1
Yaron Turpaz
Pte. Ltd.
Co-authored papers 1
Kameswaran Surendran
Sanford School of Medicine, University of South Dakota
Co-authored papers 1
Yan Li
Co-authored papers 1
Li Li
Co-authored papers 1
Zhiguang Li
Co-authored papers 1
Wendell D Jones
Department of Bioinformatics and Clinical Systems
Co-authored papers 1
Max Bylesjö
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Mauro Delorenzi
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Jun Luo
Co-authored papers 1
R Mitchell Parry
Co-authored papers 1
Xiaohui Fan
College of Life Sciences, Zhejiang University
Co-authored papers 1
Weida Tong
National Center for Toxicological Research
Co-authored papers 1
Hasitha Premathilake
Oklahoma State University
Co-authored papers 1
Johan Trygg
Co-authored papers 1
Sadik A Khuder
Co-authored papers 1
Matthias Kohl
Co-authored papers 1
Pablo V Gejman
Co-authored papers 1
Release 1.2