Author details

Full Name

Kuo Ping Chiu

Affiliation

ORCID

Career Start Year

1992

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37460589	Genome sequencing and application of Taiwanese macaque Macaca cyclopis.		2023
34294840	Transcriptome-level assessment of the impact of deformed wing virus on honey bee larvae.	Scientific Reports	2021
32731431	Comprehensive Cohort Analysis of Mutational Spectrum in Early Onset Breast Cancer Patients.	Cancers	2020
33075172	Comparison of gut microbiota of healthy and diseased walking sticks, Phasmotaenia lanyuhensis.	Archives of Insect Biochemistry and Physiology	2020
31404440	Application of cell-free DNA sequencing in characterization of bloodborne microbes and the study of microbe-disease interactions.	PeerJ	2019
31538236	Long-read sequencing in deciphering human genetics to a greater depth.	Human Genetics	2019
31133070	Genomic sequencing of Troides aeacus nucleopolyhedrovirus (TraeNPV) from golden birdwing larvae (Troides aeacus formosanus) to reveal defective Autographa californica NPV genomic features.	BMC Genomics	2019
29504912	Analysis of microbial sequences in plasma cell-free DNA for early-onset breast cancer patients and healthy females.	BMC Medical Genomics	2018
29920548	Single cell transcriptome analysis of MCF-7 reveals consistently and inconsistently expressed gene groups each associated with distinct cellular localization and functions.	PLoS ONE	2018
28094343	T Oligo-Primed Polymerase Chain Reaction (TOP-PCR): A Robust Method for the Amplification of Minute DNA Fragments in Body Fluids.	Scientific Reports	2017
26202883	Predominant structural configuration of natural antibody repertoires enables potent antibody responses against protein antigens.	Scientific Reports	2015
26125617	Complete Taiwanese Macaque (Macaca cyclopis) Mitochondrial Genome: Reference-Assisted de novo Assembly with Multiple k-mer Strategy.	PLoS ONE	2015
24268647	Antibody variable domain interface and framework sequence requirements for stability and function by high-throughput experiments.	Structure	2014
24268648	Loop-sequence features and stability determinants in antibody variable domains by high-throughput experiments.	Structure	2014
23472152	Concordant and discordant regulation of target genes by miR-31 and its isoforms.	PLoS ONE	2013
24358224	Global assessment of Antrodia cinnamomea-induced microRNA alterations in hepatocarcinoma cells.	PLoS ONE	2013
23281822	Palindromic sequence impedes sequencing-by-ligation mechanism.	BMC Systems Biology	2012
19300518	De-novo identification of PPARgamma/RXR binding sites and direct targets during adipogenesis.	PLoS One	2009
18285362	The use of multiple displacement amplification to amplify complex DNA libraries.	Nucleic Acids Research	2008
18371363	Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells.	Cell Stem Cell	2007
17568001	Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).	Genome Res	2007
17707233	Genome-wide mapping of RELA(p65) binding identifies E2F1 as a transcriptional activator recruited by NF-kappaB upon TLR4 activation.	Mol Cell	2007
17594473	Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomes.	BMC Cancer	2007
17542648	Whole-genome cartography of estrogen receptor alpha binding sites.	PLoS Genet	2007
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
16518401	The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells.	Nat Genet	2006
16413492	A global map of p53 transcription-factor binding sites in the human genome.	Cell	2006
16840528	Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes.	Nucleic Acids Research	2006
16934139	PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data.	BMC Bioinformatics	2006
17093053	Global mapping of c-Myc binding sites and target gene networks in human B cells.	Proc Natl Acad Sci U S A	2006
15782207	Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation.	Nat Methods	2005
16141072	The transcriptional landscape of the mammalian genome.	Science	2005
15272081	5' Long serial analysis of gene expression (LongSAGE) and 3' LongSAGE for transcriptome characterization and genome annotation.	Proc Natl Acad Sci U S A	2004
12781537	Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection.	Lancet	2003
9459482	Nuclear clustering in myotubes: a proposed role in acetylcholine receptor mRNA expression.		1998
8835790	A novel in situ double-labeling method for simultaneous detection of mRNA and expressed protein or two different mRNAs.	Journal of Neuroscience Methods	1996
8780863	Improved in situ hybridization: color intensity enhancement procedure for the alkaline phosphatase/Fast Red system.	BioTechniques	1996
1313061	Intracellular amplification of proviral DNA in tissue sections using the polymerase chain reaction.	Journal of Histochemistry and Cytochemistry	1992