Skip to Main Content

Author Details

Jeffrey A Rosenfeld
Cancer Institute of New Jersey
2004
44
22
PMIDPaper TitleJournal TitlePublished Year
35357935A complete reference genome improves analysis of human genetic variation.Science2022
34692584RNA-seq profile of African American men with a clinically localized prostate cancer.Prostate Int2021
33712587Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.Nat Commun2021
32133155Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder.NPJ Genom Med2020
31951591IGF2 drives formation of ileal neuroendocrine tumors in patients and mice.Endocr Relat Cancer2020
31860080Whole Genome Sequencing and Assembly of the Asian Honey Bee Apis dorsata.Genome Biol Evol2020
32699374Author Correction: A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
32923111Genomic and immunologic correlates of LAG-3 expression in cancer.Oncoimmunology2020
32541955A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
31536510TCF4 induces enzalutamide resistance via neuroendocrine differentiation in prostate cancer.PLoS One2019
27866013A whole genome gene content phylogenetic analysis of anopheline mosquitoes.Mol Phylogenet Evol2017
28154808Patient-Derived Xenograft Models of Non-Small Cell Lung Cancer and Their Potential Utility in Personalized Medicine.Front Oncol2017
28241792Genome content analysis yields new insights into the relationship between the human malaria parasite Plasmodium falciparum and its anopheline vectors.BMC Genomics2017
28978720Gamma Secretase Inhibition by BMS-906024 Enhances Efficacy of Paclitaxel in Lung Adenocarcinoma.Mol Cancer Ther2017
28575287An essential domain of an early-diverged RNA polymerase II functions to accurately decode a primitive chromatin landscape.Nucleic Acids Res2017
26836631Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.Nat Commun2016
26549428Insect genome content phylogeny and functional annotation of core insect genomes.Mol Phylogenet Evol2016
27617305The mitogenome of the bed bug <i>Cimex lectularius</i> (Hemiptera: Cimicidae).Mitochondrial DNA B Resour2016
25725478High throughput sequencing analysis of Trypanosoma brucei DRBD3/PTB1-bound mRNAs.Mol Biochem Parasitol2015
26862572Data for constructing insect genome content matrices for phylogenetic analysis and functional annotation.Data Brief2015
26100517The impact of read length on quantification of differentially expressed genes and splice junction detection.Genome Biol2015
24586155Inflammatory monocytes orchestrate innate antifungal immunity in the lung.PLoS Pathog2014
25150835Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.Nat Biotechnol2014
24764495Response to 'pervasive sequence patents cover the entire human genome' - authors' reply.Genome Med2014
23325106Implication of a rare deletion at distal 16p11.2 in schizophrenia.JAMA Psychiatry2013
24079746Crowdfunding genomics and bioinformatics.Genome Biol2013
24092746Integrative annotation of variants from 1092 humans: application to cancer genomics.Science2013
24253340Genome-wide association study implicates NDST3 in schizophrenia and bipolar disorder.Nat Commun2013
23522065Pervasive sequence patents cover the entire human genome.Genome Med2013
21920466Mycobacterium tuberculosis spoligotypes that may derive from mixed strain infections are revealed by a novel computational approach.Infect Genet Evol2012
22811759Limitations of the human reference genome for personalized genomics.PLoS One2012
22445448Random roots and lineage sorting.Mol Phylogenet Evol2012
22306824E value cutoff and eukaryotic genome content phylogenetics.Mol Phylogenet Evol2012
22277159Implications for health and disease in the genetic signature of the Ashkenazi Jewish population.Genome Biol2012
22344438A systematic survey of loss-of-function variants in human protein-coding genes.Science2012
22179743Condensin dysfunction in human cells induces nonrandom chromosomal breaks in anaphase, with distinct patterns for both unique and repeated genomic regions.Chromosoma2012
34875790The mega-matrix tree of life: using genome-scale horizontal gene transfer and sequence evolution data as information about the vertical history of life.Cladistics2011
20488869Novel multi-nucleotide polymorphisms in the human genome characterized by whole genome and exome sequencing.Nucleic Acids Res2010
19335899Determination of enriched histone modifications in non-genic portions of the human genome.BMC Genomics2009
19786836Investigating repetitively matching short sequencing reads: the enigmatic nature of H3K9me3.Epigenetics2009
18552846Combinatorial patterns of histone acetylations and methylations in the human genome.Nat Genet2008
19139635Using whole genome presence/absence data to untangle function in 12 Drosophila genomes.Fly (Austin)2008
16861208Reciprocal illumination in the gene content tree of life.Syst Biol2006
15271781ORFcurator: molecular curation of genes and gene clusters in prokaryotic organisms.Bioinformatics2004
  • 1 - 44 of 44

Recommended Authors

Marta Gut
Universitat de Barcelona (UB)
Career Start Year 2010
Number of shared co-authors 12
Aakrosh Ratan
Center for Public Health Genomics, University of Virginia
Career Start Year 2008
Number of shared co-authors 12
Francesc L??pez-Gir??ldez
Yale Center for Genomic Analysis
Career Start Year 2005
Number of shared co-authors 4
Manolis Kellis
Massachusetts Institute of Technology
Career Start Year 2003
Number of shared co-authors 23
Katherine S Pollard
Gladstone Institutes
Career Start Year 2002
Number of shared co-authors 10
Christie L Kovar
Baylor College of Medicine
Career Start Year 2002
Number of shared co-authors 10
Brent S Pedersen
Center for Molecular Medicine, University Medical Center Utrecht
Career Start Year 2001
Number of shared co-authors 6
Michael C Zody
Broad Institute of Harvard and MIT
Career Start Year 2001
Number of shared co-authors 29
Tyler Alioto
Universitat de Barcelona (UB)
Career Start Year 2001
Number of shared co-authors 10
Jeong-Hyeon Choi
National Marine Biodiversity Institute of Korea
Career Start Year 2000
Number of shared co-authors 4
Chinnappa D Kodira
GE Global Research Center
Career Start Year 1999
Number of shared co-authors 11
Kirsten McLay
Inivata Ltd.
Career Start Year 1999
Number of shared co-authors 12
Vineet Bafna
University of California San Diego
Career Start Year 1998
Number of shared co-authors 3
Ian Korf
University of California davis
Career Start Year 1998
Number of shared co-authors 12
Anton Nekrutenko
The Pennsylvania State University, University Park
Career Start Year 1998
Number of shared co-authors 8
Sarah J Wheelan
National Human Genome Research Institute, National Institutes of Health
Career Start Year 1998
Number of shared co-authors 6
Lee Murphy
Edinburgh Clinical Research Facility, University of Edinburgh
Career Start Year 1998
Number of shared co-authors 6
Colin A Semple
Institute of Genetics and Cancer, University of Edinburgh
Career Start Year 1997
Number of shared co-authors 1
Guillaume Bourque
Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University
Career Start Year 1997
Number of shared co-authors 18
Steven J M Jones
University of British Columbia
Career Start Year 1995
Number of shared co-authors 13
Mark Yandell
University of Utah
Career Start Year 1994
Number of shared co-authors 14
Lucinda Fulton
McDonnell Genome Institute, Washington University School of Medicine
Career Start Year 1994
Number of shared co-authors 23
Ewan Birney
European Bioinformatics Institute
Career Start Year 1992
Number of shared co-authors 22
Steven L Salzberg
Center for Computational Biology, Johns Hopkins University
Career Start Year 1992
Number of shared co-authors 19
LaDeana W Hillier
University of Washington
Career Start Year 1991
Number of shared co-authors 26
Kim C Worley
Baylor College of Medicine
Career Start Year 1991
Number of shared co-authors 25
Gustavo Glusman
Institute for Systems Biology
Career Start Year 1988
Number of shared co-authors 9
David Haussler
Genomics Institute, University of California Santa Cruz
Career Start Year 1986
Number of shared co-authors 33
Richard K Wilson
The Ohio State University
Career Start Year 1983
Number of shared co-authors 32
Richard Durbin
University of Cambridge
Career Start Year 1964
Number of shared co-authors 36

Collaborators

Christopher E Mason
Feil Family Brain and Mind Research Institute.
Co-authored papers 12
Jonathan Foox
Co-authored papers 5
Fritz J Sedlazeck
Baylor College of Medicine
Co-authored papers 4
Todd Lencz
Co-authored papers 4
Anil K Malhotra
Co-authored papers 4
Michael C Schatz
Johns Hopkins University
Co-authored papers 4
Nancy F Hansen
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Sergey Koren
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
John M Kane
Co-authored papers 3
Joyce Lee
Co-authored papers 3
Peter K Gregersen
Co-authored papers 3
Shawn Levy
HudsonAlpha Institute for Biotechnology
Co-authored papers 3
Iman Hajirasouliha
Institute for Computational Biomedicine
Co-authored papers 3
Adam M Phillippy
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Justin M Zook
National Institute of Standards and Technology
Co-authored papers 3
Nathan D Olson
National Institute of Standards and Technology
Co-authored papers 3
Chunlin Xiao
Chongqing Aier Eye Hospital
Co-authored papers 3
Annette T Lee
Co-authored papers 3
Alexandre Rouette
Charles-Bruneau Cancer Center, Centre Hospitalier Universitaire (CHU) Sainte-Justine
Co-authored papers 2
Indra Neil Sarkar
Center for Biomedical Informatics, Brown University
Co-authored papers 2
Noushin Ghaffari
Prairie View A&M University
Co-authored papers 2
Adam C English
Baylor College of Medicine Human Genome Sequencing Center
Co-authored papers 2
Chris Tyler-Smith
Wellcome Sanger Institute
Co-authored papers 2
Weichen Zhou
Chengdu First People's Hospital
Co-authored papers 2
Markus M N??then
Institute of Human Genetics, University Hospital Bonn
Co-authored papers 2
Emmanouil T Dermitzakis
University of Geneva
Co-authored papers 2
Ken Chen
University of Texas MD Anderson Cancer Center
Co-authored papers 2
Ryan E Mills
University of Michigan Medical School ann arbor
Co-authored papers 2
Camir Ricketts
Institute for Computational Biomedicine, Weill Cornell Medicine of Cornell University
Co-authored papers 2
Mark Gerstein
Yale University
Co-authored papers 2
Release 1.2