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Author Details

Shujun Luo
Predicine Inc.
2000
53
44
PMIDPaper TitleJournal TitlePublished Year
36693175Genomic Complexity Predicts Resistance to Endocrine Therapy and CDK4/6 Inhibition in Hormone Receptor-Positive (HR+)/HER2-Negative Metastatic Breast Cancer.Clin Cancer Res2023
37310016Triple-negative Breast Carcinoma With Apocrine and Histiocytoid Features: A Clinicopathologic and Molecular Study of 18 Cases.Am J Surg Pathol2023
36693175Genomic Complexity Predicts Resistance to Endocrine Therapy and CDK4/6 Inhibition in Hormone Receptor-Positive (HR+)/HER2-Negative Metastatic Breast Cancer.Clin Cancer Res2023
37310016Triple-negative Breast Carcinoma With Apocrine and Histiocytoid Features: A Clinicopathologic and Molecular Study of 18 Cases.Am J Surg Pathol2023
32015550Author Correction: Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.Nat Biotechnol2020
32015550Author Correction: Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.Nat Biotechnol2020
29565360Corrigendum: Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.Nature2018
30323172High prevalence of focal and multi-focal somatic genetic variants in the human brain.Nat Commun2018
29565360Corrigendum: Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.Nature2018
30323172High prevalence of focal and multi-focal somatic genetic variants in the human brain.Nat Commun2018
27411634Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.Nature2016
27411634Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.Nature2016
26149387LIN28A Modulates Splicing and Gene Expression Programs in Breast Cancer Cells.Mol Cell Biol2015
26269718Achieving high-sensitivity for clinical applications using augmented exome sequencing.Genome Med2015
26149387LIN28A Modulates Splicing and Gene Expression Programs in Breast Cancer Cells.Mol Cell Biol2015
26269718Achieving high-sensitivity for clinical applications using augmented exome sequencing.Genome Med2015
24973947Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study.Nat Methods2014
24973947Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study.Nat Methods2014
23824657A mutation in TGFB3 associated with a syndrome of low muscle mass, growth retardation, distal arthrogryposis and clinical features overlapping with Marfan and Loeys-Dietz syndrome.Am J Med Genet A2013
23824657A mutation in TGFB3 associated with a syndrome of low muscle mass, growth retardation, distal arthrogryposis and clinical features overlapping with Marfan and Loeys-Dietz syndrome.Am J Med Genet A2013
22144199MicroRNA expression analysis using the Illumina microRNA-Seq Platform.Methods Mol Biol2012
22934102Single-neuron RNA-Seq: technical feasibility and reproducibility.Front Genet2012
22341448Genome sequencing and analysis of the Tasmanian devil and its transmissible cancer.Cell2012
22915640Monitoring chronic lymphocytic leukemia progression by whole genome sequencing reveals heterogeneous clonal evolution patterns.Blood2012
22771536Highly sensitive profiling of CD44+/CD24- breast cancer stem cells by combining global mRNA amplification and next generation sequencing: evidence for a hyperactive PI3K pathway.Cancer Lett2012
22820318Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.Nat Biotechnol2012
22901804Transcriptome-wide regulation of pre-mRNA splicing and mRNA localization by muscleblind proteins.Cell2012
23145101mRNA-Seq of single prostate cancer circulating tumor cells reveals recapitulation of gene expression and pathways found in prostate cancer.PLoS One2012
22144199MicroRNA expression analysis using the Illumina microRNA-Seq Platform.Methods Mol Biol2012
22934102Single-neuron RNA-Seq: technical feasibility and reproducibility.Front Genet2012
23145101mRNA-Seq of single prostate cancer circulating tumor cells reveals recapitulation of gene expression and pathways found in prostate cancer.PLoS One2012
22771536Highly sensitive profiling of CD44+/CD24- breast cancer stem cells by combining global mRNA amplification and next generation sequencing: evidence for a hyperactive PI3K pathway.Cancer Lett2012
22915640Monitoring chronic lymphocytic leukemia progression by whole genome sequencing reveals heterogeneous clonal evolution patterns.Blood2012
22820318Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.Nat Biotechnol2012
22901804Transcriptome-wide regulation of pre-mRNA splicing and mRNA localization by muscleblind proteins.Cell2012
22341448Genome sequencing and analysis of the Tasmanian devil and its transmissible cancer.Cell2012
20967605High-throughput SuperSAGE.Methods Mol Biol2011
21273488Metagenomic discovery of biomass-degrading genes and genomes from cow rumen.Science2011
21346796Noncanonical compensation of zygotic X transcription in early Drosophila melanogaster development revealed through single-embryo RNA-seq.PLoS Biol2011
20967605High-throughput SuperSAGE.Methods Mol Biol2011
21364760Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing.PLoS One2011
21235772Global analysis of estrogen receptor beta binding to breast cancer cell genome reveals an extensive interplay with estrogen receptor alpha for target gene regulation.BMC Genomics2011
21880599Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq.Nucleic Acids Res2011
21876754Meraculous: de novo genome assembly with short paired-end reads.PLoS One2011
21706015Direct measurement of DNA affinity landscapes on a high-throughput sequencing instrument.Nat Biotechnol2011
22086488Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection.mBio2011
21642536Modeling and automation of sequencing-based characterization of RNA structure.Proc Natl Acad Sci U S A2011
21642531Multiplexed RNA structure characterization with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq).Proc Natl Acad Sci U S A2011
21775473RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries.RNA2011
22086488Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection.mBio2011
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Collaborators

Gary P Schroth
Co-authored papers 43
Stephen F Kingsmore
Rady Children's Institute for Genomic Medicine
Co-authored papers 4
Christian D Haudenschild
Institute of Biological Chemistry, Washington State University
Co-authored papers 4
Christopher B Burge
Co-authored papers 3
David R Bentley
Illumina Cambridge Ltd.
Co-authored papers 3
Sean Humphray
Illumina Ltd.
Co-authored papers 3
Neil C Chi
University of California San Diego
Co-authored papers 2
Russell J Grocock
Illumina Ltd
Co-authored papers 2
Jennifer A Doudna
Innovative Genomics Institute, University of California berkeley
Co-authored papers 2
Nigel P Carter
4Wellcome Trust Sanger Institute
Co-authored papers 2
Nan Leng
Xijing Hospital, The Fourth Military Medical University
Co-authored papers 2
Lior Pachter
Co-authored papers 2
Pan Du
Co-authored papers 2
Carolyn Tregidgo
King's College London
Co-authored papers 2
Andrew D Farmer
National Center for Genome Resources
Co-authored papers 2
Ian T Fiddes
Liver Center and Diabetes Center, University of California san francisco
Co-authored papers 2
Chad Nusbaum
Co-authored papers 2
Mark T Ross
Illumina Cambridge Ltd.
Co-authored papers 2
Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 2
Len A Pennacchio
Lawrence Berkeley National Laboratory
Co-authored papers 1
Atul J Butte
Bakar Computational Health Sciences Institute, University of California san francisco
Co-authored papers 1
Thomas J Vasicek
Howard Hughes Medical Institute, Princeton University
Co-authored papers 1
Stanton L Martin
Oak Ridge National Laboratory
Co-authored papers 1
Matthew E Hurles
Wellcome Sanger Institute
Co-authored papers 1
Michael B Eisen
Howard Hughes Medical Institute, University of California Berkeley
Co-authored papers 1
Nir Friedman
Co-authored papers 1
AmirAli Talasaz
University of California San Diego Moores Cancer Center
Co-authored papers 1
Jorge R Oksenberg
Co-authored papers 1
Leath A Tonkin
Co-authored papers 1
Pieter Mestdagh
Co-authored papers 1
Release 1.2