Author details

Full Name

Marco Mina

Affiliation

University of Lausanne, Switzerland Swiss Cancer Center Leman

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36182742	Epistasis and evolutionary dependencies in human cancers.	Curr Opin Genet Dev	2022
33972523	Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes.	Nat Commun	2021
33563664	Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression.	Cancer Discov	2021
34344431	Systematic assessment of gene co-regulation within chromatin domains determines differentially active domains across human cancers.	Genome Biol	2021
34289354	Cell-autonomous inflammation of BRCA1-deficient ovarian cancers drives both tumor-intrinsic immunoreactivity and immune resistance via STING.	Cell Rep	2021
32330455	Cathepsin S Regulates Antigen Processing and T Cell Activity in Non-Hodgkin Lymphoma.	Cancer Cell	2020
32989323	Discovering functional evolutionary dependencies in human cancers.	Nat Genet	2020
30664764	Uncoupling protein 2 reprograms the tumor microenvironment to support the anti-tumor immune cycle.	Nat Immunol	2019
31655256	Dynamic Emergence of Observed and Hidden Intra-tumor Heterogeneity.	iScience	2019
31398338	The Oncogenic Action of NRF2 Depends on De-glycation by Fructosamine-3-Kinase.	Cell	2019
30862953	Publisher Correction: Uncoupling protein 2 reprograms the tumor microenvironment to support the anti-tumor immune cycle.	Nat Immunol	2019
30692681	EZH2 oncogenic mutations drive epigenetic, transcriptional, and structural changes within chromatin domains.	Nat Genet	2019
29625050	Oncogenic Signaling Pathways in The Cancer Genome Atlas.	Cell	2018
30212491	Pan-cancer inference of intra-tumor heterogeneity reveals associations with different forms of genomic instability.	PLoS Genet	2018
30355485	Pan-Cancer Landscape of Aberrant DNA Methylation across Human Tumors.	Cell Rep	2018
29617658	Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas.	Cell Rep	2018
28756993	Conditional Selection of Genomic Alterations Dictates Cancer Evolution and Oncogenic Dependencies.	Cancer Cell	2017
29180618	A transcribed enhancer dictates mesendoderm specification in pluripotency.	Nat Commun	2017
26356023	Improving the Robustness of Local Network Alignment: Design and Extensive Assessment of a Markov Clustering-Based Approach.	IEEE/ACM Trans Comput Biol Bioinform	2014
24565382	M-Finder: Uncovering functionally associated proteins from interactome data integrated with GO annotations.	Proteome Sci	2013
22138322	Semantic similarity analysis of protein data: assessment with biological features and issues.	Brief Bioinform	2012
22719866	AlignNemo: a local network alignment method to integrate homology and topology.	PLoS One	2012

1 - 22 of 22

Daniel H??bschmann

Heidelberg Institute for Stem Cell Technology and Experimental Medicine (HI-STEM)

Career Start Year 2016

Number of shared co-authors 0

Evan O Paull

Columbia University Irving Medical Center

Career Start Year 2013

Number of shared co-authors 12

Fabio Vandin

University of Padova

Career Start Year 2011

Number of shared co-authors 3

Matan Hofree

Broad Institute of Harvard and MIT

Career Start Year 2010

Number of shared co-authors 2

Joshua F McMichael

Washington University

Career Start Year 2009

Number of shared co-authors 13

Hannah Carter

University of California San Diego

Career Start Year 2008

Number of shared co-authors 4

J??ri Reimand

Ontario Institute for Cancer Research

Career Start Year 2007

Number of shared co-authors 9

Moritz Gerstung

German Cancer Research Centre DKFZ

Career Start Year 2007

Number of shared co-authors 0

Siyuan Zheng

Greehey Children's Cancer Research Institute

Career Start Year 2007

Number of shared co-authors 19

Xiaotu Ma

St. Jude Children's Research Hospital

Career Start Year 2006

Number of shared co-authors 1

David C Wedge

Manchester Cancer Research Centre, University of Manchester

Career Start Year 2006

Number of shared co-authors 2

Matti Nykter

Prostate Cancer Research Center, Tampere University and Tays Cancer Center

Career Start Year 2006

Number of shared co-authors 6

James C Costello

University of Colorado Anschutz Medical Campus

Career Start Year 2006

Number of shared co-authors 3

Jeroen de Ridder

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 2006

Number of shared co-authors 0

Abel Gonzalez-Perez

Universitat Pompeu Fabra

Career Start Year 2005

Number of shared co-authors 12

Kai Wang

Pfizer Inc.

Career Start Year 2004

Number of shared co-authors 0

Matthias Schlesner

University of Augsburg

Career Start Year 2004

Number of shared co-authors 1

Adam A Margolin

Icahn School of Medicine

Career Start Year 2004

Number of shared co-authors 11

Florian Markowetz

CRUK Cambridge Institute, University of Cambridge

Career Start Year 2003

Number of shared co-authors 2

Peter Van Loo

The Francis Crick Institute

Career Start Year 2003

Number of shared co-authors 2

Benjamin J Raphael

Princeton University

Career Start Year 2003

Number of shared co-authors 19

Jianhua Zhang

University of Texas MD Anderson Cancer Center

Career Start Year 2003

Number of shared co-authors 16

Olivier Elemento

Meyer Cancer Center

Career Start Year 2002

Number of shared co-authors 11

Chen-Hsiang Yeang

Institute of Statistical Science

Career Start Year 2001

Number of shared co-authors 2

Gad Getz

Broad Institute of the Massachusetts Institute of Technology and Harvard

Career Start Year 2000

Number of shared co-authors 28

Lodewyk F A Wessels

University Medical Centre Mannheim, University of Heidelberg

Career Start Year 2000

Number of shared co-authors 3

Joshua M Stuart

University of California at Santa Cruz

Career Start Year 2000

Number of shared co-authors 24

Andrew J Gentles

Stanford Center for Biomedical Informatics Research, Stanford University

Career Start Year 1999

Number of shared co-authors 7

Andrea Califano

Columbia University

Career Start Year 1993

Number of shared co-authors 9

Pablo Tamayo

University of California San Diego

Career Start Year 1988

Number of shared co-authors 10

row(s) 1 - 30 of 30

Giovanni Ciriello

University of Lausanne (UNIL)

Co-authored papers 18

Pietro Hiram Guzzi

Magna Graecia University

Co-authored papers 4

Francisco Vega

The University of Texas MD Anderson Cancer Center

Co-authored papers 3

Sadegh Saghafinia

University of Lausanne (UNIL)

Co-authored papers 3

Nikolaus Schultz

Memorial Sloan Kettering Cancer Center

Co-authored papers 3

Gregory P Way

Broad Institute of MIT and Harvard

Co-authored papers 2

Andrew D Cherniack

Dana-Farber Cancer Institute

Co-authored papers 2

Walid K Chatila

Memorial Sloan Kettering Cancer Center

Co-authored papers 2

Joshua Armenia

Oncology R&D

Co-authored papers 2

Casey S Greene

Dartmouth College Geisel School of Medicine, Princeton University, University of Colorado Anschutz Medical Campus, University of Pennsylvania Perelman School of Medicine

Co-authored papers 2

Konnor La

The Rockefeller University

Co-authored papers 2

Casey S Greene

Co-authored papers 2

Augustin Luna

Harvard Medical School

Co-authored papers 2

Chris Sander

Broad Institute of MIT and Harvard

Co-authored papers 2