Author details

Full Name

Max W Chang

Affiliation

University of California San Diego

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

Trey Ideker (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36758547	Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients.	Cell Rep Med	2023
37425792	Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian Hamsters.	bioRxiv	2023
36720308	Oral arsenic administration to humanizedUDP-glucuronosyltransferase1 neonatal mice induces UGT1A1 through a dependence on Nrf2 and PXR.	J Biol Chem	2023
35793637	Diet and feeding pattern modulate diurnal dynamics of the ileal microbiome and transcriptome.	Cell Rep	2022
35651629	Glucocorticoid Receptor-Regulated Enhancers Play a Central Role in the Gene Regulatory Networks Underlying Drug Addiction.	Front Neurosci	2022
34462742	Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19.	bioRxiv	2021
33930332	Functional landscape of SARS-CoV-2 cellular restriction.	Mol Cell	2021
34556855	Restriction factor compendium for influenza A virus reveals a mechanism for evasion of autophagy.	Nat Microbiol	2021
32511357	A Large-scale Drug Repositioning Survey for SARS-CoV-2 Antivirals.	bioRxiv	2020
31776276	Viral Determinants in H5N1 Influenza A Virus Enable Productive Infection of HeLa Cells.	J Virol	2020
32707573	Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing.	Nature	2020
32839537	Influenza virus repurposes the antiviral protein IFIT2 to promote translation of viral mRNAs.	Nat Microbiol	2020
32522852	A Genome-Wide CRISPR-Cas9 Screen Reveals the Requirement of Host Cell Sulfation for Schmallenberg Virus Infection.	J Virol	2020
30787439	MHC class II proteins mediate cross-species entry of bat influenza viruses.	Nature	2019
31649059	Identification and dynamic quantification of regulatory elements using total RNA.	Genome Res	2019
30174302	Time-Restricted Feeding Prevents Obesity and Metabolic Syndrome in Mice Lacking a Circadian Clock.	Cell Metab	2019
31092690	ApoC-III ASO promotes tissue LPL activity in the absence of apoE-mediated TRL clearance.	J Lipid Res	2019
30944313	Metascape provides a biologist-oriented resource for the analysis of systems-level datasets.	Nat Commun	2019
29791506	SHMT2 and the BRCC36/BRISC deubiquitinase regulate HIV-1 Tat K63-ubiquitylation and destruction by autophagy.	PLoS Pathog	2018
30146161	Transcription Elongation Can Affect Genome 3D Structure.	Cell	2018
30030441	Antibiotic-induced microbiome depletion alters metabolic homeostasis by affecting gut signaling and colonic metabolism.	Nat Commun	2018
29439024	Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.	Science	2018
29378911	Massively Parallel Sequencing of Peritoneal and Splenic B Cell Repertoires Highlights Unique Properties of B-1 Cell Antibodies.	J Immunol	2018
28965760	Chemical Proteomics Identifies Druggable Vulnerabilities in a Genetically Defined Cancer.	Cell	2017
25894830	Deep sequencing of protease inhibitor resistant HIV patient isolates reveals patterns of correlated mutations in Gag and protease.	PLoS Comput Biol	2015
26516283	Disease tolerance mediated by microbiome E. coli involves inflammasome and IGF-1 signaling.	Science	2015
26408523	CoVaMa: Co-Variation Mapper for disequilibrium analysis of mutant loci in viral populations using next-generation sequence data.	Methods	2015
26564964	A comprehensive multiomics approach toward understanding the relationship between aging and dementia.	Aging (Albany NY)	2015
23540839	Small molecule regulation of protein conformation by binding in the Flap of HIV protease.	ACS Chem Biol	2013
23384677	Rapid deep sequencing of patient-derived HIV with ion semiconductor technology.	J Virol Methods	2013
22587465	Identification of HIV-1 inhibitors targeting the nucleocapsid protein.	J Med Chem	2012
21762813	Accessory mutations maintain stability in drug-resistant HIV-1 protease.	J Mol Biol	2011
20507280	Identification of broad-based HIV-1 protease inhibitors from combinatorial libraries.	Biochem J	2010
20694138	Virtual screening for HIV protease inhibitors: a comparison of AutoDock 4 and Vina.	PLoS One	2010
18351616	Empirical entropic contributions in computational docking: evaluation in APS reductase complexes.	J Comput Chem	2008
17447753	Analysis of HIV wild-type and mutant structures via in silico docking against diverse ligand libraries.	J Chem Inf Model	2007

1 - 36 of 36

Taha Y Taha

Gladstone Institutes

Career Start Year 2015

Number of shared co-authors 3

Yushen Du

University of California los angeles

Career Start Year 2014

Number of shared co-authors 11

Matthew J O'Meara

University of Michigan ann arbor

Career Start Year 2013

Number of shared co-authors 14

Markus-Frederik Bohn

Department of Pharmaceutical Chemistry, University of California San Francisco

Career Start Year 2012

Number of shared co-authors 9

Jonas Demeulemeester

VIB-KU Leuven Center for Cancer Biology

Career Start Year 2010

Number of shared co-authors 0

Tian-Hao Zhang

David Geffen School of Medicine, University of California los angeles

Career Start Year 2009

Number of shared co-authors 6

Austin Huang

Alabama College of Osteopathic Medicine

Career Start Year 2007

Number of shared co-authors 0

Will Dampier

Drexel University College of Medicine

Career Start Year 2007

Number of shared co-authors 0

Jason A Wojcechowskyj

Gladstone Institutes

Career Start Year 2007

Number of shared co-authors 6

Kristen K Dang

Benaroya Research Institute at Virginia Mason

Career Start Year 2006

Number of shared co-authors 0

Fabio Zanini

Stanford University

Career Start Year 2006

Number of shared co-authors 3

Fergal Casey

Biogen Inc.

Career Start Year 2006

Number of shared co-authors 1

Agnes C Paquet

Universite Cote d'Azur, CNRS UMR5

Career Start Year 2004

Number of shared co-authors 0

David Marciano

Stanford Cardiovascular Institute (L.W., Stanford University School of Medicine

Career Start Year 2003

Number of shared co-authors 0

Priya S Shah

University of California davis

Career Start Year 2002

Number of shared co-authors 10

Satish K Pillai

Vitalant Research Institute, USA University of California san francisco

Career Start Year 2001

Number of shared co-authors 4

Jason F Kreisberg

University of California San Diego

Career Start Year 2000

Number of shared co-authors 12

Nevena Veljkovic

Heliant Ltd

Career Start Year 1999

Number of shared co-authors 0

Renate K??nig

Paul-Ehrlich-Institut

Career Start Year 1998

Number of shared co-authors 26

Lily Tong

MRC - University of Glasgow Centre for Virus Research, University of Glasgow

Career Start Year 1998

Number of shared co-authors 1

Viviana Simon

Icahn School of Medicine at Mount Sinai

Career Start Year 1997

Number of shared co-authors 27

Niall J Lennon

Broad Institute of MIT and Harvard.

Career Start Year 1997

Number of shared co-authors 0

Joseph L DeRisi

University of California San Francisco

Career Start Year 1994

Number of shared co-authors 3

Melanie Ott

Gladstone Institute of Virology

Career Start Year 1993

Number of shared co-authors 17

Wei Shao

Inc., Frederick National Laboratory for Cancer Research

Career Start Year 1993

Number of shared co-authors 2

Celia A Schiffer

University of Massachusetts Chan Medical School

Career Start Year 1990

Number of shared co-authors 2

Ram Samudrala

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

Career Start Year 1990

Number of shared co-authors 0

Frederic D Bushman

Perelman School of Medicine, University of Pennsylvania

Career Start Year 1983

Number of shared co-authors 13

Daria J Hazuda

Merck & Co. Inc.

Career Start Year 1983

Number of shared co-authors 4

Amalio Telenti

Vir Biotechnology Inc.

Career Start Year 1977

Number of shared co-authors 1

row(s) 1 - 30 of 30

Christopher Benner

Michigan State University College of Human Medicine

Co-authored papers 18

Adolfo Garc??a-Sastre

Icahn School of Medicine at Mount Sinai

Co-authored papers 10

Lars Pache

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 7

Satchidananda Panda

The Salk Institute for Biological Studies

Co-authored papers 6

Sumit K Chanda

The Scripps Research Institute

Co-authored papers 6

Paul D De Jesus

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 5

Laura Martin-Sancho

The Scripps Research Institute

Co-authored papers 5

Randy A Albrecht

Icahn School of Medicine at Mount Sinai

Co-authored papers 4

Sascha H Duttke

College of Veterinary Medicine, Washington State University

Co-authored papers 4

Laura Riva

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 4

Martin Schwemmle

Institute of Virology, Medical Center - University of Freiburg

Co-authored papers 3

Arthur J Olson

Co-authored papers 3

Jason F Okulicz

Co-authored papers 3

Yuan Pu

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 3

Amandine Chaix

University of Utah

Co-authored papers 3

Lisa Miorin

Icahn School of Medicine at Mount Sinai

Co-authored papers 3

Ariel Rodriguez-Frandsen

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 3

Kris M White

Quantitative Biosciences Institute (QBI) Coronavirus Research Group (QCRG)

Co-authored papers 3

Xin Yin

Sanford Burnham Prebys Medical Discovery Institute

Co-authored papers 3

Robert Kim

University of California

Co-authored papers 2

Andrew I Su

The Scripps Research Institute

Co-authored papers 2

Michael Schotsaert

Icahn School of Medicine at Mount Sinai

Co-authored papers 2

Megan L Shaw

Icahn School of Medicine at Mount Sinai

Co-authored papers 2

Alan Saghatelian

Salk Institute for Biological Studies

Co-authored papers 2

Judd F Hultquist

Northwestern University Feinberg School of Medicine

Co-authored papers 2

Jeffrey R Johnson

Gladstone Institutes

Co-authored papers 2

Dexter Pratt (CM4AI)

UC San Diego

Co-authored papers 2

Joseph L Witztum

Co-authored papers 2

Sven Heinz

U.C. San Diego School of Medicine

Co-authored papers 2

Ignacio Mena

Icahn School of Medicine at Mount Sinai

Co-authored papers 2

1 - 30

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