Author details

Full Name

Simon J Larsen

Affiliation

University of Southern Denmark

ORCID

Career Start Year

2017

Papers

H Index

Expertise

CM4AI Collaborator

Trey Ideker (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37228113	Hierarchical association of COPD to principal genetic components of biological systems.	PLoS One	2023
32558887	DeepCLIP: predicting the effect of mutations on protein-RNA binding with deep learning.	Nucleic Acids Res	2020
33007869	Inflammatory Breast Cancer: Clinical Implications of Genomic Alterations and Mutational Profiling.	Cancers (Basel)	2020
30462289	E. coli gene regulatory networks are inconsistent with gene expression data.	Nucleic Acids Res	2019
31192117	Increased Levels of Genomic Instability and Mutations in Homologous Recombination Genes in Locally Advanced Rectal Carcinomas.	Front Oncol	2019
30925701	Comprehensive Genomic Profiling of Androgen-Receptor-Negative Canine Prostate Cancer.	Int J Mol Sci	2019
30894481	From single drug targets to synergistic network pharmacology in ischemic stroke.	Proc Natl Acad Sci U S A	2019
30891005	The Selection of a Hepatocyte Cell Line Susceptible to <i>Plasmodium falciparum</i> Sporozoite Invasion That Is Associated With Expression of Glypican-3.	Front Microbiol	2019
31060523	Genomic profiling in ovarian cancer retreated with platinum based chemotherapy presented homologous recombination deficiency and copy number imbalances of CCNE1 and RB1 genes.	BMC Cancer	2019
29776329	CoNVaQ: a web tool for copy number variation-based association studies.	BMC Genomics	2018
28731857	CytoMCS: A Multiple Maximum Common Subgraph Detection Tool for Cytoscape.	J Integr Bioinform	2017

1 - 11 of 11

Hui Yu

Sylvester Comprehensive Cancer Center, University of Miami

Career Start Year 2017

Number of shared co-authors 0

Geoff Macintyre

CRUK Cambridge Institute, University of Cambridge

Career Start Year 2009

Number of shared co-authors 0

Kahn Rhrissorrakrai

T.J. Watson Research Center

Career Start Year 2008

Number of shared co-authors 0

Ludwig Geistlinger

Center for Computational Biomedicine, Harvard Medical School

Career Start Year 2008

Number of shared co-authors 0

J??ri Reimand

Ontario Institute for Cancer Research

Career Start Year 2007

Number of shared co-authors 0

James C Costello

University of Colorado Anschutz Medical Campus

Career Start Year 2006

Number of shared co-authors 0

Andrey Alexeyenko

Karolinska Institutet

Career Start Year 2006

Number of shared co-authors 0

Jeroen de Ridder

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 2006

Number of shared co-authors 0

Avi Ma'ayan

Icahn School of Medicine at Mount Sinai

Career Start Year 2005

Number of shared co-authors 0

Abel Gonzalez-Perez

Universitat Pompeu Fabra

Career Start Year 2005

Number of shared co-authors 0

Xianghong Jasmine Zhou

David Geffen School of Medicine, University of California at Los Angeles

Career Start Year 2004

Number of shared co-authors 0

Florian Markowetz

CRUK Cambridge Institute, University of Cambridge

Career Start Year 2003

Number of shared co-authors 0

Zhandong Liu

Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital

Career Start Year 2003

Number of shared co-authors 0

Olivier Elemento

Meyer Cancer Center

Career Start Year 2002

Number of shared co-authors 0

Chen-Hsiang Yeang

Institute of Statistical Science

Career Start Year 2001

Number of shared co-authors 1

Olga G Troyanskaya

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Career Start Year 2001

Number of shared co-authors 2

Gary D Bader

University of Toronto

Career Start Year 2000

Number of shared co-authors 2

Joshua M Stuart

University of California at Santa Cruz

Career Start Year 2000

Number of shared co-authors 1

Igor Jurisica

Schroeder Arthritis Institute

Career Start Year 1998

Number of shared co-authors 0

Zhongming Zhao

Center for Precision Health, The University of Texas Health Science Center at Houston

Career Start Year 1998

Number of shared co-authors 0

Ralf Herwig

Max Planck Institute for Molecular Genetics

Career Start Year 1998

Number of shared co-authors 1

Wolfgang Huber

Technische Universitat Munchen

Career Start Year 1995

Number of shared co-authors 0

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 1

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 1

Andrea Califano

Columbia University

Career Start Year 1993

Number of shared co-authors 1

Jill P Mesirov

University of California San Diego

Career Start Year 1992

Number of shared co-authors 1

Emmanuel Barillot

Institut Curie, Universite PSL

Career Start Year 1991

Number of shared co-authors 0

Robert Gentleman

Center for Computational Biomedicine, Harvard Medical School

Career Start Year 1991

Number of shared co-authors 0

Jean-Pierre A Kocher

Mayo Clinic

Career Start Year 1991

Number of shared co-authors 0

John Quackenbush

Harvard T. H. Chan School of Public Health

Career Start Year 1989

Number of shared co-authors 3

row(s) 1 - 30 of 30

Jan Baumbach

University of Hamburg

Co-authored papers 9

Vikram Sirupurapu

University of California San Diego

Co-authored papers 1

Edwin K Silverman

Brigham and Women's Hospital

Co-authored papers 1

Daniel E Carlin

University of California San Diego

Co-authored papers 1

Michael H Cho

Brigham and Women's Hospital Channing Division of Network Medicine

Co-authored papers 1

Trey Ideker (CM4AI)

University of California San Diego

Co-authored papers 1

1 - 6

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