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Author Details

Justin L Sonnenburg
Stanford University
1996
123
57
PMIDPaper TitleJournal TitlePublished Year
36803658Randomized controlled trial demonstrates response to a probiotic intervention for metabolic syndrome that may correspond to diet.Gut Microbes2023
37693407A mutant fitness compendium in Bifidobacteria reveals molecular determinants of colonization and host-microbe interactions.bioRxiv2023
38045399Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome.bioRxiv2023
38032644Cardiometabolic Effects of Omnivorous vs Vegan Diets in Identical Twins: A Randomized Clinical Trial.JAMA Netw Open2023
35727787Gut Microbiome Redox Sensors With Ultrasonic Wake-Up and Galvanic Coupling Wireless Links.IEEE Trans Biomed Eng2023
37348505Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes.Cell2023
36945614Hadza <i>Prevotella</i> Require Diet-derived Microbiota Accessible Carbohydrates to Persist in Mice.bioRxiv2023
36753629A Limited Effect of Chronic Renal Insufficiency on the Colon Microbiome.J Am Soc Nephrol2023
36720857Host-microbe co-metabolism via MCAD generates circulating metabolites including hippuric acid.Nat Commun2023
36692308Butyrate Differentiates Permissiveness to Clostridioides difficile Infection and Influences Growth of Diverse C. difficile Isolates.Infect Immun2023
35051349Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota.Cell Host Microbe2022
35679413Robust variation in infant gut microbiome assembly across a spectrum of lifestyles.Science2022
35643079Impact of a 7-day homogeneous diet on interpersonal variation in human gut microbiomes and metabolomes.Cell Host Microbe2022
35483363Global, distinctive, and personal changes in molecular and microbial profiles by specific fibers in humans.Cell Host Microbe2022
36070752Design, construction, and in vivo augmentation of a complex gut microbiome.Cell2022
36238714Ultra-deep Sequencing of Hadza Hunter-Gatherers Recovers Vanishing Gut Microbes.bioRxiv2022
34992297Oxidative ornithine metabolism supports non-inflammatory C.â¿¿difficile colonization.Nat Metab2022
33087860Mucin-derived O-glycans supplemented to diet mitigate diverse microbiota perturbations.ISME J2021
33911281C. difficile exploits a host metabolite produced during toxin-mediated disease.Nature2021
34473943Quantifying rapid bacterial evolution and transmission within the mouse intestine.Cell Host Microbe2021
34789871Reporting guidelines for human microbiome research: the STORMS checklist.Nat Med2021
34262212A metabolomics pipeline for the mechanistic interrogation of the gut microbiome.Nature2021
34007025Ancient human faeces reveal gut microbes of the past.Nature2021
34256014Gut-microbiota-targeted diets modulate human immune status.Cell2021
32483557The Clinical Drug Ebselen Attenuates Inflammation and Promotes Microbiome Recovery in Mice after Antibiotic Treatment for CDI.Cell Rep Med2020
32084341A Metabolic Pathway for Activation of Dietary Glucosinolates by a Human Gut Symbiont.Cell2020
31959968Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition.Nat Microbiol2020
31634824In Vivo Wireless Sensors for Gut Microbiome Redox Monitoring.IEEE Trans Biomed Eng2020
32101703Dysbiosis-Induced Secondary Bile Acid Deficiency Promotes Intestinal Inflammation.Cell Host Microbe2020
33031771Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs.Cell Host Microbe2020
33077598<i>Bifidobacterium</i> alters the gut microbiota and modulates the functional metabolism of T regulatory cells in the context of immune checkpoint blockade.Proc Natl Acad Sci U S A2020
33186523Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome.Cell2020
33299969Bacterially Derived Tryptamine Increases Mucus Release by Activating a Host Receptor in a Mouse Model of Inflammatory Bowel Disease.iScience2020
33125887When Gut Microbiota Creep into Fat, the Fat Creeps Back.Cell2020
32606025High-Throughput Stool Metaproteomics: Method and Application to Human Specimens.mSystems2020
32916129Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome.Cell2020
32601452Phase-variable capsular polysaccharides and lipoproteins modify bacteriophage susceptibility in Bacteroides thetaiotaomicron.Nat Microbiol2020
32652063Bacteroides thetaiotaomicron-Infecting Bacteriophage Isolates Inform Sequence-Based Host Range Predictions.Cell Host Microbe2020
32780794A randomized crossover trial on the effect of plant-based compared with animal-based meat on trimethylamine-N-oxide and cardiovascular disease risk factors in generally healthy adults: Study With Appetizing Plantfood-Meat Eating Alternative Trial (SWAP-MEAT).Am J Clin Nutr2020
32186326Long-term dietary intervention reveals resilience of the gut microbiota despite changes in diet and weight.Am J Clin Nutr2020
31089293The ancestral and industrialized gut microbiota and implications for human health.Nat Rev Microbiol2019
31726029Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs.Cell Host Microbe2019
31690674Intestinal IgA Regulates Expression of a Fructan Polysaccharide Utilization Locus in Colonizing Gut Commensal Bacteroides thetaiotaomicron.mBio2019
31831639Depletion of microbiome-derived molecules in the host using <i>Clostridium</i> genetics.Science2019
31649168Vulnerability of the industrialized microbiota.Science2019
30118385Links between environment, diet, and the hunter-gatherer microbiome.Gut Microbes2019
31433970Pursuing Human-Relevant Gut Microbiota-Immune Interactions.Immunity2019
31043597Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders.Nat Commun2019
30808756Western diet regulates immune status and the response to LPS-driven sepsis independent of diet-associated microbiome.Proc Natl Acad Sci U S A2019
31125257Role for diet in normal gut barrier function: developing guidance within the framework of food-labeling regulations.Am J Physiol Gastrointest Liver Physiol2019
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Co-authored papers 19
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Co-authored papers 12
Addenbrooke's Hospital, University of Cambridge
Co-authored papers 10
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Co-authored papers 9
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Co-authored papers 7
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University of Minnesota
Co-authored papers 4
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Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai Medical Center
Co-authored papers 3
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Co-authored papers 3
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Co-authored papers 3
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Washington University in St. Louis
Co-authored papers 2
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Co-authored papers 2
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Clinical Biochemical Genetics Laboratory
Co-authored papers 2
University of Minnesota
Co-authored papers 2
Stanford University
Co-authored papers 2
Lawrence Berkeley National Laboratory
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Keio University School of Medicine
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Department of Bioinformatics and Clinical Systems
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Monash University
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David Geffen School of Medicine, University of California Los Angeles
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