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Author Details

Mark Gerstein
Yale University
1991
619
141
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36350676FAVOR: functional annotation of variants online resource and annotator for variation across the human genome.Nucleic Acids Res2023
36350676FAVOR: functional annotation of variants online resource and annotator for variation across the human genome.Nucleic Acids Res2023
36420896GENCODE: reference annotation for the human and mouse genomes in 2023.Nucleic Acids Res2023
37708273Resisting efficiency's overreach<b>Optimal Illusions: The False Promise of Optimization</b> <i>Coco Krumme</i> Riverhead Books, 2023. 256 pp.Science2023
36717667Privacy-preserving cancer type prediction with homomorphic encryption.Sci Rep2023
36517591Recurrent repeat expansions in human cancer genomes.Nature2023
37410793Constructing a full, multiple-layer interactome for SARS-CoV-2 in the context of lung disease: Linking the virus with human genes and microbes.PLoS Comput Biol2023
37467337More than bad luck: Cancer and aging are linked to replication-driven changes to the epigenome.Sci Adv2023
36649054Estimation of Bedtimes of Reddit Users: Integrated Analysis of Time Stamps and Surveys.JMIR Form Res2023
36945630Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.medRxiv2023
36697832Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.Nature2023
36477833Insights from incorporating quantum computing into drug design workflows.Bioinformatics2023
36692135Binding peptide generation for MHC Class I proteins with deep reinforcement learning.Bioinformatics2023
37235891The association between evening social media use and delayed sleep may be causal: Suggestive evidence from 120 million Reddit timestamps.Sleep Med2023
36858880Unified views on variant impact across many diseases.Trends Genet2023
37295433Minor intron splicing is critical for survival of lethal prostate cancer.Mol Cell2023
37231011Genetic determination of regional connectivity in modelling the spread of COVID-19 outbreak for more efficient mitigation strategies.Sci Rep2023
37228754exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers.Cell Genom2023
37167370Calculating the future<b>Quantum Supremacy: How the Quantum Computer Revolution Will Change Everything</b> <i>Michio Kaku</i> Doubleday, 2023. 352 pp.Science2023
37292896The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity.bioRxiv2023
37708273Resisting efficiency's overreach<b>Optimal Illusions: The False Promise of Optimization</b> <i>Coco Krumme</i> Riverhead Books, 2023. 256 pp.Science2023
36945630Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.medRxiv2023
37410793Constructing a full, multiple-layer interactome for SARS-CoV-2 in the context of lung disease: Linking the virus with human genes and microbes.PLoS Comput Biol2023
37467337More than bad luck: Cancer and aging are linked to replication-driven changes to the epigenome.Sci Adv2023
37235891The association between evening social media use and delayed sleep may be causal: Suggestive evidence from 120 million Reddit timestamps.Sleep Med2023
37167370Calculating the future<b>Quantum Supremacy: How the Quantum Computer Revolution Will Change Everything</b> <i>Michio Kaku</i> Doubleday, 2023. 352 pp.Science2023
37231011Genetic determination of regional connectivity in modelling the spread of COVID-19 outbreak for more efficient mitigation strategies.Sci Rep2023
37228754exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers.Cell Genom2023
37295433Minor intron splicing is critical for survival of lethal prostate cancer.Mol Cell2023
37292896The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity.bioRxiv2023
36858880Unified views on variant impact across many diseases.Trends Genet2023
36697832Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.Nature2023
36477833Insights from incorporating quantum computing into drug design workflows.Bioinformatics2023
36517591Recurrent repeat expansions in human cancer genomes.Nature2023
36717667Privacy-preserving cancer type prediction with homomorphic encryption.Sci Rep2023
36692135Binding peptide generation for MHC Class I proteins with deep reinforcement learning.Bioinformatics2023
36649054Estimation of Bedtimes of Reddit Users: Integrated Analysis of Time Stamps and Surveys.JMIR Form Res2023
36420896GENCODE: reference annotation for the human and mouse genomes in 2023.Nucleic Acids Res2023
34811555Author Correction: Functional genomics data: privacy risk assessment and technological mitigation.Nat Rev Genet2022
36301997Venus: An efficient virus infection detection and fusion site discovery method using single-cell and bulk RNA-seq data.PLoS Comput Biol2022
35765079Storing and analyzing a genome on a blockchain.Genome Biol2022
35958027Phase 2 of extracellular RNA communication consortium charts next-generation approaches for extracellular RNA research.iScience2022
36086138Privacy-preserving Model Training for Disease Prediction Using Federated Learning with Differential Privacy.Annu Int Conf IEEE Eng Med Biol Soc2022
36083269Building integrative functional maps of gene regulation.Hum Mol Genet2022
35417011Cancer Relevance of Human Genes.J Natl Cancer Inst2022
36323788Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD.Nature2022
35725981Forest Fire Clustering for single-cell sequencing combines iterative label propagation with parallelized Monte Carlo simulations.Nat Commun2022
35474001Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes.Nature2022
35981024Genomic research data and the justice system.Science2022
36424644Illuminating links between cis-regulators and trans-acting variants in the human prefrontal cortex.Genome Med2022
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Collaborators

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Co-authored papers 132
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Weill Institute for Cell and Molecular Biology, Cornell University
Co-authored papers 33
Reichman University (IDC) Herzliya
Co-authored papers 32
Baylor College of Medicine
Co-authored papers 31
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Co-authored papers 27
Co-authored papers 26
Co-authored papers 24
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Co-authored papers 23
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University of Toronto
Co-authored papers 22
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Co-authored papers 22
University of Wisconsin-Madison
Co-authored papers 22
Co-authored papers 21
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Co-authored papers 18
Barcelona Institute of Science and Technology
Co-authored papers 18
Stanley Institute for Cognitive Genomics
Co-authored papers 18
Co-authored papers 18
University of Bern
Co-authored papers 18
University of Massachusetts Medical School
Co-authored papers 17
Co-authored papers 17
Yale University
Co-authored papers 16
Yale University School of Medicine
Co-authored papers 16
Co-authored papers 16