Author details

Full Name

Hao Li

Affiliation

School of Public Health, Guangdong Medical University

ORCID

Career Start Year

2002

Papers

H Index

Expertise

CM4AI Collaborator

Trey Ideker (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36084774	The fecal arsenic excretion, tissue arsenic accumulation, and metabolomics analysis in sub-chronic arsenic-exposed mice after in situ arsenic-induced fecal microbiota transplantation.	Sci Total Environ	2023
37081759	Megf10-related engulfment of excitatory postsynapses by astrocytes following severe brain injury.	CNS Neurosci Ther	2023
37335434	Application of Lineage Tracing in Central Nervous System Development and Regeneration.	Mol Biotechnol	2023
36254991	Neutrophil-derived interleukin-17A participates in neuroinflammation induced by traumatic brain injury.	Neural Regen Res	2023
35868500	Contralateral synaptic changes following severe unilateral brain injury.	Brain Res Bull	2022
35370735	<i>In Vivo</i> Dopamine Neuron Imaging-Based Small Molecule Screen Identifies Novel Neuroprotective Compounds and Targets.	Front Pharmacol	2022
34550070	A zebrafish screen reveals Renin-angiotensin system inhibitors as neuroprotective via mitochondrial restoration in dopamine neurons.	Elife	2021
32388597	First detection and genomic characteristics of bovine torovirus in dairy calves in China.	Arch Virol	2020
33318184	Rewiring the specificity of extracytoplasmic function sigma factors.	Proc Natl Acad Sci U S A	2020
32821821	Life span extension by glucose restriction is abrogated by methionine supplementation: Cross-talk between glucose and methionine and implication of methionine as a key regulator of life span.	Sci Adv	2020
32894404	The impact of aging and COVID-19 on our immune system: a high-resolution map from single cell analysis.	Protein Cell	2020
30669151	Inferring Gene-Disease Association by an Integrative Analysis of eQTL Genome-Wide Association Study and Protein-Protein Interaction Data.	Hum Hered	2018
30053424	The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders.	Cell	2018
28448036	Using Microfluidic Devices to Measure Lifespan and Cellular Phenotypes in Single Budding Yeast Cells.	J Vis Exp	2017
28212626	A global characterization of the translational and transcriptional programs induced by methionine restriction through ribosome profiling and RNA-seq.	BMC Genomics	2017
26902284	saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription.	Cell Res	2016
25723167	Early telomerase inactivation accelerates aging independently of telomere length.	Cell	2015
26351681	Systematic analysis of asymmetric partitioning of yeast proteome between mother and daughter cells reveals "aging factors" and mechanism of lifespan asymmetry.	Proc Natl Acad Sci U S A	2015
24608180	Dynamic characterization of growth and gene expression using high-throughput automated flow cytometry.	Nat Methods	2014
23643380	Sherlock: detecting gene-disease associations by matching patterns of expression QTL and GWAS.	Am J Hum Genet	2013
24086155	Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cells.	PLoS Genet	2013
23625967	Microfluidic affinity and ChIP-seq analyses converge on a conserved FOXP2-binding motif in chimp and human, which enables the detection of evolutionarily novel targets.	Nucleic Acids Res	2013
22416120	Regulatory architecture determines optimal regulation of gene expression in metabolic pathways.	Proc Natl Acad Sci U S A	2012
23144860	Single cell analysis of yeast replicative aging using a new generation of microfluidic device.	PLoS One	2012
23139336	Mitochondrial network size scaling in budding yeast.	Science	2012
23066505	The unfolded protein response in fission yeast modulates stability of select mRNAs to maintain protein homeostasis.	Elife	2012
22498653	Molecular phenotyping of aging in single yeast cells using a novel microfluidic device.	Aging Cell	2012
20133331	Positioned and G/C-capped poly(dA:dT) tracts associate with the centers of nucleosome-free regions in yeast promoters.	Genome Res	2010
20833319	Evolution of transcription networks--lessons from yeasts.	Curr Biol	2010
20802496	De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis.	Nat Biotechnol	2010
20959818	Epistatic relationships reveal the functional organization of yeast transcription factors.	Mol Syst Biol	2010
18369141	Evolution of eukaryotic transcription circuits.	Science	2008
18950538	CompMoby: comparative MobyDick for detection of cis-regulatory motifs.	BMC Bioinformatics	2008
19040743	c-REDUCE: incorporating sequence conservation to detect motifs that correlate with expression.	BMC Bioinformatics	2008
18563967	Dynamics and design principles of a basic regulatory architecture controlling metabolic pathways.	PLoS Biol	2008
18303948	The evolution of combinatorial gene regulation in fungi.	PLoS Biol	2008
17194212	Alternative 3' pre-mRNA processing in Saccharomyces cerevisiae is modulated by Nab4/Hrp1 in vivo.	PLoS Biol	2007
17941998	fREDUCE: detection of degenerate regulatory elements using correlation with expression.	BMC Bioinformatics	2007
17559307	Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor.	PLoS Genet	2007
17674075	Similarity of synonymous substitution rates across mammalian genomes.	J Mol Evol	2007
17784790	Systematic identification of cis-regulatory sequences active in mouse and human embryonic stem cells.	PLoS Genet	2007
17699749	Cell- and gene-specific regulation of primary target genes by the androgen receptor.	Genes Dev	2007
16537505	Highly designable phenotypes and mutational buffers emerge from a systematic mapping between network topology and dynamic output.	Proc Natl Acad Sci U S A	2006
17006507	Evolution of alternative transcriptional circuits with identical logic.	Nature	2006
15703440	Functional specificity of shuttling hnRNPs revealed by genome-wide analysis of their RNA binding profiles.	RNA	2005
16297241	Genome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computational genomic analysis.	BMC Bioinformatics	2005
16077094	Regulation of cellular plasticity in Drosophila imaginal disc cells by the Polycomb group, trithorax group and lama genes.	Development	2005
15653830	Genome-wide regulatory complexity in yeast promoters: separation of functionally conserved and neutral sequence.	Genome Res	2005
15723796	Identification of transcriptional regulatory elements in chemosensory receptor genes by probabilistic segmentation.	Curr Biol	2005
14730301	Comparing genomic expression patterns across species identifies shared transcriptional profile in aging.	Nat Genet	2004

1 - 50 of 55

Katrin Sameith

Center for Molecular and Cellular Bioengineering

Career Start Year 2006

Number of shared co-authors 4

Stephen A Ramsey

Oregon State University

Career Start Year 2004

Number of shared co-authors 0

Sarath Chandra Janga

Indiana University

Career Start Year 2004

Number of shared co-authors 1

Matthew T Weirauch

University of Cincinnati College of Medicine

Career Start Year 2003

Number of shared co-authors 5

Mikael Huss

Stockholm University

Career Start Year 2003

Number of shared co-authors 0

Manolis Kellis

Massachusetts Institute of Technology

Career Start Year 2003

Number of shared co-authors 6

Madan Mohan Babu

St. Jude Children's Research Hospital

Career Start Year 2002

Number of shared co-authors 1

Zhaolei Zhang

University of Toronto

Career Start Year 2002

Number of shared co-authors 2

Olga G Troyanskaya

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Career Start Year 2001

Number of shared co-authors 1

Eran Segal

Weizmann Institute of Science

Career Start Year 2001

Number of shared co-authors 2

Stephen Watt

Wellcome Sanger Institute

Career Start Year 1999

Number of shared co-authors 2

Erik van Nimwegen

University of Basel

Career Start Year 1998

Number of shared co-authors 1

Lars M Steinmetz

Stanford University

Career Start Year 1998

Number of shared co-authors 7

Panayiotis V Benos

University of Florida

Career Start Year 1996

Number of shared co-authors 3

Sarah A Teichmann

Wellcome Sanger Institute

Career Start Year 1996

Number of shared co-authors 5

Vishwanath R Iyer

Indian Institute of Technology Bombay

Career Start Year 1995

Number of shared co-authors 1

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 4

Christopher T Workman

Technical University of Denmark

Career Start Year 1995

Number of shared co-authors 1

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 1

Simon Kasif

Boston University

Career Start Year 1993

Number of shared co-authors 1

Joel S Bader

Johns Hopkins University

Career Start Year 1993

Number of shared co-authors 7

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 3

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 1

Timothy R Hughes

University of Toronto

Career Start Year 1992

Number of shared co-authors 7

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 11

Wing Hung Wong

Stanford University

Career Start Year 1991

Number of shared co-authors 1

Andreas Beyer

University of Cologne

Career Start Year 1991

Number of shared co-authors 1

Michael B Eisen

Howard Hughes Medical Institute, University of California Berkeley

Career Start Year 1988

Number of shared co-authors 1

Marian J A Groot Koerkamp

Princess Maxima Center for Pediatric Oncology Research

Career Start Year 1983

Number of shared co-authors 4

Michael Snyder

Stanford University

Career Start Year 1981

Number of shared co-authors 9

row(s) 1 - 30 of 30

Jiashun Zheng

University of California San Francisco

Co-authored papers 13

Joseph L DeRisi

University of California San Francisco

Co-authored papers 3

Steven A McCarroll

Co-authored papers 3

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 2

Katerina Kechris

Co-authored papers 2

Gerard Cagney

Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin

Co-authored papers 2

Onn Brandman

Stanford University

Co-authored papers 2

Bo Huang

University of California san francisco

Co-authored papers 2

Christine Guthrie

University of California san francisco

Co-authored papers 2

Miguel Ramalho-Santos

University of Toronto

Co-authored papers 2

Su Guo

University of California san francisco

Co-authored papers 2

Carol A Gross

University of California san francisco

Co-authored papers 2

Kathy H Li

West China Hospital, Sichuan University

Co-authored papers 1

Graeme W Davis

Kavli Institute for Fundamental Neuroscience, University of California san francisco

Co-authored papers 1

David A Agard

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Co-authored papers 1

Vikaas S Sohal

University of California san francisco

Co-authored papers 1

Li Gan

Helen and Robert Appel Alzheimer's Disease Research Institute

Co-authored papers 1

Mark von Zastrow

University of California san francisco

Co-authored papers 1

Julie Ahringer

Co-authored papers 1

Bin Zhang

Graduate School of Medicine, The University of Tokyo

Co-authored papers 1

Michael J Keiser

Institute for Neurodegenerative Diseases, University of California san francisco

Co-authored papers 1

Hugo J Bellen

Baylor College of Medicine

Co-authored papers 1

Ruth H??ttenhain

Quantitative Biosciences Institute (QBI), University of California san francisco

Co-authored papers 1

Mustafa K Khokha

Yale University School of Medicine

Co-authored papers 1

Shoudan Liang

The University of Texas MD Anderson Cancer Center

Co-authored papers 1

Daniel H Lowenstein

University of California san francisco

Co-authored papers 1

Loren M Frank

University of California san francisco

Co-authored papers 1

Kevin J Bender

University of California san francisco

Co-authored papers 1

Brian K Shoichet

Department of Pharmaceutical Chemistry, University of California san francisco

Co-authored papers 1

Richard P Lifton

The Rockefeller University

Co-authored papers 1

1 - 30

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