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Author Details
Full Name
Colin Diesh
Affiliation
University of California berkeley
ORCID
Career Start Year
2016
Papers
12
H Index
8
Expertise
CM4AI Collaborator
PMID
Paper Title
Journal Title
Published Year
36648320
JBrowse Jupyter: a Python interface to JBrowse 2.
Bioinformatics
2023
37069644
JBrowse 2: a modular genome browser with views of synteny and structural variation.
Genome Biol
2023
34196689
JBrowseR: an R interface to the JBrowse 2 genome browser.
Bioinformatics
2021
34817058
CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing.
Gigascience
2021
32537769
Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome.
Anim Genet
2020
31647100
Bovine Genome Database: new annotation tools for a new reference genome.
Nucleic Acids Res
2020
30726205
Apollo: Democratizing genome annotation.
PLoS Comput Biol
2019
31099383
Cram-JS: reference-based decompression in node and the browser.
Bioinformatics
2019
28365742
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata.
Database (Oxford)
2017
27072794
JBrowse: a dynamic web platform for genome visualization and analysis.
Genome Biol
2016
26578564
Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine.
Nucleic Acids Res
2016
26481361
Bovine Genome Database: new tools for gleaning function from the Bos taurus genome.
Nucleic Acids Res
2016
1 - 12 of 12
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row(s) 1 - 30 of 30
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Oklahoma State University
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The Scripps Research Institute
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Chunlei Wu
The Scripps Research Institute
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Gregg A Helt
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Nomi L Harris
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
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1
Alexej Abyzov
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Andrew I Su
The Scripps Research Institute
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Junjun Zhang
Ontario Institute for Cancer Research
Co-authored papers
1
Tim Putman
University of Colorado
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Andra Waagmeester
Maastricht University
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1 - 22